BLASTX nr result

ID: Coptis24_contig00025544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025544
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154590.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    97   1e-18
ref|XP_004140047.1| PREDICTED: uncharacterized protein LOC101210...    97   1e-18
ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258...    96   3e-18
emb|CAN83259.1| hypothetical protein VITISV_032134 [Vitis vinifera]    96   3e-18
emb|CBI37806.3| unnamed protein product [Vitis vinifera]               91   7e-17

>ref|XP_004154590.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210512
           [Cucumis sativus]
          Length = 1436

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/119 (47%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
 Frame = -1

Query: 403 LVGSVVEKGFSTVNKTFPSTPLPLPRPSVLPFPVARHRSHGPHWAPLTS-----SNKMXX 239
           LVG +VEKG S   ++ P   LP PRPSVLPFPVARHRSHGPHW  LTS     S K   
Sbjct: 37  LVGGIVEKGISDTEQSTPFVSLPPPRPSVLPFPVARHRSHGPHWESLTSKKGGDSIKADR 96

Query: 238 XXXXXXXXXXXXDTHFSSFANPIQRKQKKTLNFSNWKELVSQDTSVITNKRAEGGKQLQ 62
                           ++FANPIQRK+K +L+F  W+E  S D +    KR E  K+LQ
Sbjct: 97  QKYGEEDETMMVADSIANFANPIQRKKKSSLDFGRWREAAS-DHNHGAAKREE--KELQ 152


>ref|XP_004140047.1| PREDICTED: uncharacterized protein LOC101210512 [Cucumis sativus]
          Length = 1604

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 57/119 (47%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
 Frame = -1

Query: 403 LVGSVVEKGFSTVNKTFPSTPLPLPRPSVLPFPVARHRSHGPHWAPLTS-----SNKMXX 239
           LVG +VEKG S   ++ P   LP PRPSVLPFPVARHRSHGPHW  LTS     S K   
Sbjct: 37  LVGGIVEKGISDTEQSTPFVSLPPPRPSVLPFPVARHRSHGPHWESLTSKKGGDSIKADR 96

Query: 238 XXXXXXXXXXXXDTHFSSFANPIQRKQKKTLNFSNWKELVSQDTSVITNKRAEGGKQLQ 62
                           ++FANPIQRK+K +L+F  W+E  S D +    KR E  K+LQ
Sbjct: 97  QKYGEEDETMMVADSIANFANPIQRKKKSSLDFGRWREAAS-DHNHGAAKREE--KELQ 152


>ref|XP_002278562.1| PREDICTED: uncharacterized protein LOC100258889 [Vitis vinifera]
          Length = 1602

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 8/116 (6%)
 Frame = -1

Query: 403 LVGSVVEKGFSTVNKTFPSTPLPLPRPSVLPFPVARHRSHGPHWAPLTS-----SNKMXX 239
           LVGS+VEKG S      P  P   P+P+VLPFPVARHRSHGPHW+P  S     ++K   
Sbjct: 39  LVGSIVEKGISGK----PPAPSSAPQPTVLPFPVARHRSHGPHWSPFGSKMGGGNDKKGA 94

Query: 238 XXXXXXXXXXXXDTHF---SSFANPIQRKQKKTLNFSNWKELVSQDTSVITNKRAE 80
                        T F   ++FANPI+RKQKK L+ SNW+ELV  D S++  ++ +
Sbjct: 95  DNSDSDDGEDMDLTGFDQIAAFANPIERKQKKGLDLSNWRELVPNDNSLLPAEKKD 150


>emb|CAN83259.1| hypothetical protein VITISV_032134 [Vitis vinifera]
          Length = 1444

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/116 (45%), Positives = 69/116 (59%), Gaps = 8/116 (6%)
 Frame = -1

Query: 403 LVGSVVEKGFSTVNKTFPSTPLPLPRPSVLPFPVARHRSHGPHWAPLTS-----SNKMXX 239
           LVGS+VEKG S      P  P   P+P+VLPFPVARHRSHGPHW+P  S     ++K   
Sbjct: 39  LVGSIVEKGISGK----PPAPSSAPQPTVLPFPVARHRSHGPHWSPFGSKMGGGNDKKGA 94

Query: 238 XXXXXXXXXXXXDTHF---SSFANPIQRKQKKTLNFSNWKELVSQDTSVITNKRAE 80
                        T F   ++FANPI+RKQKK L+ SNW+ELV  D S++  ++ +
Sbjct: 95  DNSDSDDGEDMDLTGFDQIAAFANPIERKQKKGLDLSNWRELVPNDNSLLPAEKKD 150


>emb|CBI37806.3| unnamed protein product [Vitis vinifera]
          Length = 1505

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
 Frame = -1

Query: 403 LVGSVVEKGFSTVNKTFPSTPLPLPRPSVLPFPVARHRSHGPHWAPLTS-----SNKMXX 239
           LVGS+VEKG S      P  P   P+P+VLPFPVARHRSHGPHW+P  S     ++K   
Sbjct: 39  LVGSIVEKGISGK----PPAPSSAPQPTVLPFPVARHRSHGPHWSPFGSKMGGGNDKKGA 94

Query: 238 XXXXXXXXXXXXDTHF---SSFANPIQRKQKKTLNFSNWKELVS 116
                        T F   ++FANPI+RKQKK L+ SNW+EL+S
Sbjct: 95  DNSDSDDGEDMDLTGFDQIAAFANPIERKQKKGLDLSNWRELMS 138


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