BLASTX nr result

ID: Coptis24_contig00025528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025528
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892901.1| hypothetical protein ARALYDRAFT_312606 [Arab...   108   6e-22
gb|AAD34680.1|AC006341_8 Contains a PF|01464 Transglycosylase SL...   104   7e-21
ref|NP_173079.2| uncharacterized protein [Arabidopsis thaliana] ...   104   7e-21
ref|XP_002266113.2| PREDICTED: uncharacterized protein LOC100254...   103   2e-20
ref|XP_002316147.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>ref|XP_002892901.1| hypothetical protein ARALYDRAFT_312606 [Arabidopsis lyrata subsp.
           lyrata] gi|297338743|gb|EFH69160.1| hypothetical protein
           ARALYDRAFT_312606 [Arabidopsis lyrata subsp. lyrata]
          Length = 458

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/69 (75%), Positives = 57/69 (82%)
 Frame = +2

Query: 17  YWDSRASPEDMEDLWKHSNVLKEWVMSGEKRGKVQFSLDAEKRTYLSRHELKAVAEIIVS 196
           YWDSRASPEDMED+W HS V KEW  S E+RGKV+FS D EKR YLSR ELKAVAEIIVS
Sbjct: 225 YWDSRASPEDMEDMWNHSEVCKEWTKSKEERGKVRFSQDGEKRPYLSRGELKAVAEIIVS 284

Query: 197 KHFSTGEIK 223
           K+FST  I+
Sbjct: 285 KYFSTKGIR 293



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +2

Query: 5   DAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEKRG-KVQFSLDAEKRTYLSRHELKAVA 181
           +++ +W+    PED+E++W    V  EW+  GE +G KV  S D + + YL++ E++AVA
Sbjct: 3   NSFTFWNDCVEPEDLEEMWMDPAVSAEWIDVGETKGQKVHLSRDPDGQPYLTQTEMRAVA 62

Query: 182 EIIVSKHFST 211
           +I V +HF +
Sbjct: 63  DITVRRHFDS 72


>gb|AAD34680.1|AC006341_8 Contains a PF|01464 Transglycosylase SLT domain [Arabidopsis
           thaliana]
          Length = 455

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = +2

Query: 17  YWDSRASPEDMEDLWKHSNVLKEWVMSGEKRGKVQFSLDAEKRTYLSRHELKAVAEIIVS 196
           YWDSRASPEDMED+W  S + KEW  S E+RGKV+FS D EKR YLSR ELKAVAEIIVS
Sbjct: 225 YWDSRASPEDMEDMWNQSEICKEWTKSKEERGKVRFSQDGEKRPYLSRGELKAVAEIIVS 284

Query: 197 KHFSTGEIK 223
           K+FST  I+
Sbjct: 285 KYFSTKGIR 293



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +2

Query: 5   DAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEKRG-KVQFSLDAEKRTYLSRHELKAVA 181
           +++ +W+    PED+E++W    V  EW+  GE +G KV  S D + + YL++ E++AV+
Sbjct: 3   NSFTFWNDCVEPEDLEEMWMDPAVSAEWIDVGETKGQKVHLSRDPDGQPYLTQTEMRAVS 62

Query: 182 EIIVSKHFST 211
           +I V +HF +
Sbjct: 63  DITVRRHFDS 72


>ref|NP_173079.2| uncharacterized protein [Arabidopsis thaliana]
           gi|119935884|gb|ABM06023.1| At1g16290 [Arabidopsis
           thaliana] gi|332191311|gb|AEE29432.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 419

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = +2

Query: 17  YWDSRASPEDMEDLWKHSNVLKEWVMSGEKRGKVQFSLDAEKRTYLSRHELKAVAEIIVS 196
           YWDSRASPEDMED+W  S + KEW  S E+RGKV+FS D EKR YLSR ELKAVAEIIVS
Sbjct: 225 YWDSRASPEDMEDMWNQSEICKEWTKSKEERGKVRFSQDGEKRPYLSRGELKAVAEIIVS 284

Query: 197 KHFSTGEIK 223
           K+FST  I+
Sbjct: 285 KYFSTKGIR 293



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +2

Query: 5   DAWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEKRG-KVQFSLDAEKRTYLSRHELKAVA 181
           +++ +W+    PED+E++W    V  EW+  GE +G KV  S D + + YL++ E++AV+
Sbjct: 3   NSFTFWNDCVEPEDLEEMWMDPAVSAEWIDVGETKGQKVHLSRDPDGQPYLTQTEMRAVS 62

Query: 182 EIIVSKHFST 211
           +I V +HF +
Sbjct: 63  DITVRRHFDS 72


>ref|XP_002266113.2| PREDICTED: uncharacterized protein LOC100254368 [Vitis vinifera]
           gi|296082756|emb|CBI21761.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/69 (69%), Positives = 57/69 (82%)
 Frame = +2

Query: 17  YWDSRASPEDMEDLWKHSNVLKEWVMSGEKRGKVQFSLDAEKRTYLSRHELKAVAEIIVS 196
           +WDSRASPEDM+++W H +VLKEW   GE RGKV FS D EKR YLSR E+KAVAEII+S
Sbjct: 228 FWDSRASPEDMDEMWNHPDVLKEWSKCGEIRGKVLFSHDKEKRPYLSRVEVKAVAEIILS 287

Query: 197 KHFSTGEIK 223
           KHFST ++K
Sbjct: 288 KHFSTRQVK 296



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = +2

Query: 8   AWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEKRG-KVQFSLDAEKRTYLSRHELKAVAE 184
           ++KYWD    P D+E LW   +V  EW+  GE RG KV  S D +   YL++ E+KAVA 
Sbjct: 4   SYKYWDDCVDPRDLEALWLDPDVSTEWLDVGETRGRKVHLSRDPDGEPYLTQIEMKAVAA 63

Query: 185 IIVSKHFST 211
           I+VS+HF +
Sbjct: 64  IVVSRHFDS 72


>ref|XP_002316147.1| predicted protein [Populus trichocarpa] gi|222865187|gb|EEF02318.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/70 (64%), Positives = 57/70 (81%)
 Frame = +2

Query: 17  YWDSRASPEDMEDLWKHSNVLKEWVMSGEKRGKVQFSLDAEKRTYLSRHELKAVAEIIVS 196
           YWDS+ASPE+M+++W  S V KEW  SGEKRGKV+FS D + + YLSR E+KAVA+II+S
Sbjct: 261 YWDSKASPEEMQEMWSRSEVAKEWTKSGEKRGKVRFSHDKDMKPYLSRVEMKAVADIILS 320

Query: 197 KHFSTGEIKP 226
           KHFST  +KP
Sbjct: 321 KHFSTRGVKP 330



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = +2

Query: 8   AWKYWDSRASPEDMEDLWKHSNVLKEWVMSGEKRG-KVQFSLDAEKRTYLSRHELKAVAE 184
           ++ YW+     +DME +W+   V  EW+ +GE +G KV  S D +   YL++ E+KAVA+
Sbjct: 4   SFDYWNDCVDVQDMEAMWQEPEVSTEWLDAGETKGNKVHLSRDPDGEPYLTQTEMKAVAD 63

Query: 185 IIVSKHFSTGEIKP 226
           IIV +HF + +I+P
Sbjct: 64  IIVRRHFDS-QIQP 76


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