BLASTX nr result

ID: Coptis24_contig00025527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025527
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27911.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266...   120   9e-26
ref|XP_002514110.1| conserved hypothetical protein [Ricinus comm...   109   2e-22
ref|XP_002876547.1| hypothetical protein ARALYDRAFT_486503 [Arab...   107   1e-21
ref|XP_002309197.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>emb|CBI27911.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  120 bits (302), Expect = 9e-26
 Identities = 50/85 (58%), Positives = 72/85 (84%)
 Frame = -2

Query: 255 EVLREVVERPFLDLKKELHDRLTWRSVVVCLALSPTKFIETRTLLHNWFLITGLASILEF 76
           ++L++ ++RPFL L KE H+R+ WRS+++CL LSPT F+ETR LLHNWFLITGLAS+L+ 
Sbjct: 178 KILQDTMKRPFLCLNKEFHERMDWRSIIICLVLSPTMFVETRALLHNWFLITGLASVLQL 237

Query: 75  QIKLVSSVLDVLSQPMGWSLSMEVG 1
            I++VS +LDV+S+P GW +S+E+G
Sbjct: 238 LIEVVSMILDVVSRPTGWGISVEMG 262


>ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266211 [Vitis vinifera]
          Length = 698

 Score =  120 bits (302), Expect = 9e-26
 Identities = 50/85 (58%), Positives = 72/85 (84%)
 Frame = -2

Query: 255 EVLREVVERPFLDLKKELHDRLTWRSVVVCLALSPTKFIETRTLLHNWFLITGLASILEF 76
           ++L++ ++RPFL L KE H+R+ WRS+++CL LSPT F+ETR LLHNWFLITGLAS+L+ 
Sbjct: 214 KILQDTMKRPFLCLNKEFHERMDWRSIIICLVLSPTMFVETRALLHNWFLITGLASVLQL 273

Query: 75  QIKLVSSVLDVLSQPMGWSLSMEVG 1
            I++VS +LDV+S+P GW +S+E+G
Sbjct: 274 LIEVVSMILDVVSRPTGWGISVEMG 298


>ref|XP_002514110.1| conserved hypothetical protein [Ricinus communis]
           gi|223546566|gb|EEF48064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 694

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/84 (57%), Positives = 66/84 (78%)
 Frame = -2

Query: 252 VLREVVERPFLDLKKELHDRLTWRSVVVCLALSPTKFIETRTLLHNWFLITGLASILEFQ 73
           +L+  +ERPFL   KE +DR+ WRS+++CL LSPT FI T+ LLHNWF++TGL SILE  
Sbjct: 212 ILQVTMERPFLLSSKEFYDRMEWRSILMCLVLSPTMFIHTKALLHNWFMLTGLGSILELL 271

Query: 72  IKLVSSVLDVLSQPMGWSLSMEVG 1
           I+LV+ +LDV+S+P  W +SME+G
Sbjct: 272 IELVALILDVISRPTWWGMSMELG 295


>ref|XP_002876547.1| hypothetical protein ARALYDRAFT_486503 [Arabidopsis lyrata subsp.
           lyrata] gi|297322385|gb|EFH52806.1| hypothetical protein
           ARALYDRAFT_486503 [Arabidopsis lyrata subsp. lyrata]
          Length = 685

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/83 (56%), Positives = 63/83 (75%)
 Frame = -2

Query: 252 VLREVVERPFLDLKKELHDRLTWRSVVVCLALSPTKFIETRTLLHNWFLITGLASILEFQ 73
           +L++VVERPFL +KKEL +R  WR +V+CLALSPT FI TR LLH W L+TGLAS+ E  
Sbjct: 213 ILKDVVERPFLSIKKELFERAEWRDIVICLALSPTMFINTRALLHKWLLLTGLASVFEVL 272

Query: 72  IKLVSSVLDVLSQPMGWSLSMEV 4
             LVS+++D +S+P  W + ME+
Sbjct: 273 AGLVSAIMDTISKPSLWGIPMEL 295


>ref|XP_002309197.1| predicted protein [Populus trichocarpa] gi|222855173|gb|EEE92720.1|
           predicted protein [Populus trichocarpa]
          Length = 696

 Score =  107 bits (266), Expect = 1e-21
 Identities = 46/85 (54%), Positives = 68/85 (80%)
 Frame = -2

Query: 255 EVLREVVERPFLDLKKELHDRLTWRSVVVCLALSPTKFIETRTLLHNWFLITGLASILEF 76
           ++L+E ++RPFL L  E ++R+ WRS++VCL LSP  FI+TR LLH+WFL TGL+S++E 
Sbjct: 221 KILQETIKRPFLCLSMEFYERMDWRSILVCLVLSPIMFIDTRALLHDWFLQTGLSSVVEL 280

Query: 75  QIKLVSSVLDVLSQPMGWSLSMEVG 1
            ++LVS +LDV+S+P  W LS+E+G
Sbjct: 281 LMELVSLILDVISRPTWWGLSLELG 305


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