BLASTX nr result

ID: Coptis24_contig00025520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025520
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143350.1| PREDICTED: uncharacterized protein LOC101220...    74   9e-12
ref|XP_003632163.1| PREDICTED: uncharacterized protein LOC100854...    70   2e-10
gb|AFK46086.1| unknown [Medicago truncatula]                           62   6e-08
ref|XP_003600464.1| hypothetical protein MTR_3g061480 [Medicago ...    62   6e-08
ref|NP_565278.1| uncharacterized protein [Arabidopsis thaliana] ...    61   8e-08

>ref|XP_004143350.1| PREDICTED: uncharacterized protein LOC101220685 [Cucumis sativus]
           gi|449482602|ref|XP_004156343.1| PREDICTED:
           uncharacterized protein LOC101227639 [Cucumis sativus]
          Length = 207

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
 Frame = -3

Query: 323 NYSILCAVEKESD-FELDRDKAREAXXXXXXXXXXXSKKEVTEPRKKVSSSNTVPEADDT 147
           ++SILCA E +S  FE+D DKAR+A           SKK+V+ P+KKV     VP     
Sbjct: 73  HFSILCAKESDSQQFEVDPDKARQALQELDQQLQSFSKKQVSSPKKKVVQDMNVP----- 127

Query: 146 KATMKEDMQEFSEPYFA---AVLLALTVFYNVLFLTVIKPAID 27
           ++ M+ +M E SE   A    VL   ++FYNVLF TVIKP+ID
Sbjct: 128 RSQMRGEMTEISETLLANSAVVLFIFSIFYNVLFYTVIKPSID 170


>ref|XP_003632163.1| PREDICTED: uncharacterized protein LOC100854250 [Vitis vinifera]
           gi|297746306|emb|CBI16362.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 47/111 (42%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
 Frame = -3

Query: 341 KRNVTKNYSILCAVEKESD-FELDRDKAREAXXXXXXXXXXXSKKEVTEPRKKVSSSNTV 165
           +R+   + S + AV+K+S  FE+D DKAREA           S+K+ T PRK  S+ N  
Sbjct: 41  RRSSASSVSTVHAVDKDSQQFEVDPDKAREALQKLDQQLQSLSQKQDTPPRKTASNQNLA 100

Query: 164 PEADDTKATMKEDMQEFSEPYFAAVLLAL---TVFYNVLFLTVIKPAIDGQ 21
            +       M+E+  E S  + A   LAL   T+FYNVLFLTVI+P+IDGQ
Sbjct: 101 GDQ------MREEPVELSGSFLAYSALALVVFTIFYNVLFLTVIQPSIDGQ 145


>gb|AFK46086.1| unknown [Medicago truncatula]
          Length = 149

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
 Frame = -3

Query: 419 IQKLPLISLPQIKQRTISALFNGIKFKRNVTK---NYSILCAV----EKESDFELDRDKA 261
           I K P +    + ++ +     GI  +R + K   +++  C V    E    +E+D +KA
Sbjct: 10  IYKQPPLLFASLSKQLLHNDDRGIFKERRLIKYSSSFNSCCIVHALKEDSKQYEIDPEKA 69

Query: 260 REAXXXXXXXXXXXSKKEVTEPRKKVSSSNTVPEADDTKATMKEDMQEFSEPYFAAVLLA 81
           REA           S +EV+ P+ KVS      E   ++   K ++ E      A  L+ 
Sbjct: 70  REALKELDQKIQSLSNREVSSPKLKVSEMKPTREEVISENNGKLEISESFLALLAGGLVL 129

Query: 80  LTVFYNVLFLTVIKPAIDG 24
            T+ YNVLFLTVIKPAIDG
Sbjct: 130 FTILYNVLFLTVIKPAIDG 148


>ref|XP_003600464.1| hypothetical protein MTR_3g061480 [Medicago truncatula]
           gi|355489512|gb|AES70715.1| hypothetical protein
           MTR_3g061480 [Medicago truncatula]
          Length = 145

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
 Frame = -3

Query: 419 IQKLPLISLPQIKQRTISALFNGIKFKRNVTK---NYSILCAV----EKESDFELDRDKA 261
           I K P +    + ++ +     GI  +R + K   +++  C V    E    +E+D +KA
Sbjct: 6   IYKQPPLLFASLSKQLLHNDDRGIFKERRLIKYSSSFNSCCIVHALKEDSKQYEIDPEKA 65

Query: 260 REAXXXXXXXXXXXSKKEVTEPRKKVSSSNTVPEADDTKATMKEDMQEFSEPYFAAVLLA 81
           REA           S +EV+ P+ KVS      E   ++   K ++ E      A  L+ 
Sbjct: 66  REALKELDQKIQSLSNREVSSPKLKVSEMKPTREEVISENNGKLEISESFLALLAGGLVL 125

Query: 80  LTVFYNVLFLTVIKPAIDG 24
            T+ YNVLFLTVIKPAIDG
Sbjct: 126 FTILYNVLFLTVIKPAIDG 144


>ref|NP_565278.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20198054|gb|AAD21779.2| expressed protein
           [Arabidopsis thaliana] gi|51968650|dbj|BAD43017.1|
           unknown protein [Arabidopsis thaliana]
           gi|107738048|gb|ABF83621.1| At2g01870 [Arabidopsis
           thaliana] gi|330250416|gb|AEC05510.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 157

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
 Frame = -3

Query: 347 KFKRNVTKNYSILCAVEKESDFELDRDKAREAXXXXXXXXXXXSKKEVTEPRKKVSSSNT 168
           K KR++ +   I+ A E+E  F++DRDKAREA            + +  E  + ++ +++
Sbjct: 22  KKKRHLMR---IVQATEREDSFQIDRDKAREALKQLDQQI----ESQADEKPRIINKTSS 74

Query: 167 VPEADDTKATMKEDMQEFSEPYF---AAVLLALTVFYNVLFLTVIKPAIDG 24
                +    M E+  E S  +    A VLLALT+FYN+LF+TVIKP++DG
Sbjct: 75  DVVRTNNDPIMFEEPPEISGSFLTSSAFVLLALTLFYNILFITVIKPSMDG 125


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