BLASTX nr result

ID: Coptis24_contig00025519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025519
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275901.2| PREDICTED: uncharacterized protein LOC100242...   139   2e-31
emb|CAN60471.1| hypothetical protein VITISV_028411 [Vitis vinife...   139   2e-31
gb|ABK22162.1| unknown [Picea sitchensis]                             138   5e-31
ref|XP_002328958.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
gb|AFK46399.1| unknown [Lotus japonicus]                              134   6e-30

>ref|XP_002275901.2| PREDICTED: uncharacterized protein LOC100242287 [Vitis vinifera]
          Length = 297

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/70 (94%), Positives = 70/70 (100%)
 Frame = +2

Query: 2   QELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLMETCQEAKDM 181
           QELLSKVKNVIEKPYNDHLPLIEASRLCNMDI+SHVQQVICFAFHDS+LLMETCQEAK++
Sbjct: 228 QELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAKNL 287

Query: 182 RKIVTLFYLD 211
           RKIVTLFYLD
Sbjct: 288 RKIVTLFYLD 297


>emb|CAN60471.1| hypothetical protein VITISV_028411 [Vitis vinifera]
           gi|296084366|emb|CBI24754.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/70 (94%), Positives = 70/70 (100%)
 Frame = +2

Query: 2   QELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLMETCQEAKDM 181
           QELLSKVKNVIEKPYNDHLPLIEASRLCNMDI+SHVQQVICFAFHDS+LLMETCQEAK++
Sbjct: 144 QELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQVICFAFHDSKLLMETCQEAKNL 203

Query: 182 RKIVTLFYLD 211
           RKIVTLFYLD
Sbjct: 204 RKIVTLFYLD 213


>gb|ABK22162.1| unknown [Picea sitchensis]
          Length = 272

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/70 (94%), Positives = 70/70 (100%)
 Frame = +2

Query: 2   QELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLMETCQEAKDM 181
           QELLSKVKNVIEKP+NDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLL+ETCQEAK++
Sbjct: 203 QELLSKVKNVIEKPHNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLLETCQEAKNL 262

Query: 182 RKIVTLFYLD 211
           RKIVTLFYLD
Sbjct: 263 RKIVTLFYLD 272


>ref|XP_002328958.1| predicted protein [Populus trichocarpa] gi|222839192|gb|EEE77543.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/70 (91%), Positives = 70/70 (100%)
 Frame = +2

Query: 2   QELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLMETCQEAKDM 181
           QELL+KV+NVIEKP+NDHLPLIEASRLCNMDI+SHVQQVICFAFHDSRLLMETCQEAK++
Sbjct: 143 QELLAKVQNVIEKPHNDHLPLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNL 202

Query: 182 RKIVTLFYLD 211
           RKIVTLFYLD
Sbjct: 203 RKIVTLFYLD 212


>gb|AFK46399.1| unknown [Lotus japonicus]
          Length = 288

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +2

Query: 2   QELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLMETCQEAKDM 181
           QELLSKVK VIEKPYNDHLPLIEASRLCNMDI+S VQQVICFAFHDSRLLMETCQEAK++
Sbjct: 219 QELLSKVKKVIEKPYNDHLPLIEASRLCNMDIISKVQQVICFAFHDSRLLMETCQEAKNL 278

Query: 182 RKIVTLFYLD 211
           RKIVTLFYLD
Sbjct: 279 RKIVTLFYLD 288


Top