BLASTX nr result

ID: Coptis24_contig00025516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025516
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33793.3| unnamed protein product [Vitis vinifera]              197   2e-48
ref|XP_002518999.1| conserved hypothetical protein [Ricinus comm...   178   6e-43
ref|XP_003533452.1| PREDICTED: uncharacterized protein LOC100817...   178   8e-43
ref|XP_004136401.1| PREDICTED: uncharacterized protein LOC101220...   168   8e-40
ref|XP_002334518.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>emb|CBI33793.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  197 bits (500), Expect = 2e-48
 Identities = 104/201 (51%), Positives = 142/201 (70%), Gaps = 1/201 (0%)
 Frame = -2

Query: 611 ILVSFCSACNDD-PSSEATDDATTDGLTFQVFSKILEGLAECVKCRGRGTQELKLRTLAI 435
           +LV FCS C ++   +E  ++   +   F+ FS IL+GLA CV C G GTQELKLR  AI
Sbjct: 139 LLVIFCSGCKEEMKGAEDENNDAKNASAFREFSVILDGLANCVACCGNGTQELKLRRNAI 198

Query: 434 VVLAFVASSGKLGFEVFLNPKMSNGANFLELILQALASELDAEAVESAKSAETCRERNLL 255
           ++LAF+AS GK GFE+ L  K+S   NFL LILQ L SE+D E  +S +  E  +ER LL
Sbjct: 199 IMLAFLAS-GKSGFEILLGHKLSKQTNFLVLILQLLVSEMDVEVGKSTEPPEIFKERTLL 257

Query: 254 VREALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSRMSRKGRAWWKSDSTKKRKA 75
           +REALI LNRL S+P+ S+A++  LTSSRD+ SLT+D+ +R+SR G+  W+S++  ++  
Sbjct: 258 IREALIFLNRLVSNPSYSTAVLRVLTSSRDVASLTIDIANRLSRVGQGHWQSENAARQMR 317

Query: 74  EDEIVELARVFRSRVFASLGN 12
           E EIV+LARVFR RVF+ LG+
Sbjct: 318 ESEIVDLARVFRKRVFSYLGD 338


>ref|XP_002518999.1| conserved hypothetical protein [Ricinus communis]
            gi|223541986|gb|EEF43532.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 651

 Score =  178 bits (452), Expect = 6e-43
 Identities = 97/203 (47%), Positives = 139/203 (68%), Gaps = 2/203 (0%)
 Frame = -2

Query: 614  KILVSFCSACN--DDPSSEATDDATTDGLTFQVFSKILEGLAECVKCRGRGTQELKLRTL 441
            K+L  F S C   D  +++A + +T  G     FS ILEGLA+C+ C G   ++++LR  
Sbjct: 451  KLLSVFHSGCKEGDIAANDANNASTRKG-----FSAILEGLADCIACSGNDIEDIQLRKR 505

Query: 440  AIVVLAFVASSGKLGFEVFLNPKMSNGANFLELILQALASELDAEAVESAKSAETCRERN 261
            A+++LAF+A+SGK GFE+ +N K+  G NFL LILQ L SE+D E   S++SAE+ + R 
Sbjct: 506  AVIMLAFLAASGKSGFEILVNHKLHGGKNFLMLILQVLISEMDVEMSVSSESAESIKARV 565

Query: 260  LLVREALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSRMSRKGRAWWKSDSTKKR 81
            LL+RE LILLNRL S+P  S+ ++  LT+SR+M SLT+D+V+R+SRK +    SDS  ++
Sbjct: 566  LLMREVLILLNRLVSNPGYSAVVLQVLTASREMASLTIDIVTRLSRKDQILRLSDSITRQ 625

Query: 80   KAEDEIVELARVFRSRVFASLGN 12
              E EIV+LARV + RVF  LG+
Sbjct: 626  MRESEIVDLARVLKKRVFTYLGD 648


>ref|XP_003533452.1| PREDICTED: uncharacterized protein LOC100817091 [Glycine max]
          Length = 698

 Score =  178 bits (451), Expect = 8e-43
 Identities = 102/203 (50%), Positives = 134/203 (66%), Gaps = 2/203 (0%)
 Frame = -2

Query: 614  KILVSFCSACNDDPSSEATDDATTDGLTFQVFSKILEGLAECV-KCRGRGTQELKLRTLA 438
            K+L +FC  C +   S A DD     L FQ F  IL+GL++CV  CRG G  ELK+   A
Sbjct: 496  KLLAAFCCGCKERDDSSAMDDNDL-ALHFQNFKIILQGLSDCVASCRG-GILELKVSRNA 553

Query: 437  IVVLAFVASSGKLGFEVFLNPKMS-NGANFLELILQALASELDAEAVESAKSAETCRERN 261
            I+VLAF+ASSG+ GFE+F+  K+S  G N+L LILQ L SE+D EA    +  E  RER 
Sbjct: 554  ILVLAFLASSGQPGFEIFVGHKLSCRGVNYLMLILQLLVSEMDLEAGAHGQQPEIFRERT 613

Query: 260  LLVREALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSRMSRKGRAWWKSDSTKKR 81
             L+RE LILLNRL SSP+ S+ ++H LT++RDM  LT+DV SR+S+KG+   + DS    
Sbjct: 614  FLIRETLILLNRLVSSPSYSATVLHGLTTNRDMAGLTIDVASRLSQKGKKNEQQDSMVNH 673

Query: 80   KAEDEIVELARVFRSRVFASLGN 12
              E EIV+LAR+F+ RVF   G+
Sbjct: 674  IRETEIVDLARMFKKRVFTYFGD 696


>ref|XP_004136401.1| PREDICTED: uncharacterized protein LOC101220265 [Cucumis sativus]
          Length = 732

 Score =  168 bits (425), Expect = 8e-40
 Identities = 90/198 (45%), Positives = 127/198 (64%)
 Frame = -2

Query: 605  VSFCSACNDDPSSEATDDATTDGLTFQVFSKILEGLAECVKCRGRGTQELKLRTLAIVVL 426
            V+FCS C +  ++E  ++       FQ F  IL GLA+C+ C G G +ELKLR   +++L
Sbjct: 533  VAFCSGCKEAEANEVGNENVRSAGGFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLLL 592

Query: 425  AFVASSGKLGFEVFLNPKMSNGANFLELILQALASELDAEAVESAKSAETCRERNLLVRE 246
            AF+ASSGK GFE+  + K+   +NFL LILQ +ASEL+ E     +  E   ER LL+RE
Sbjct: 593  AFLASSGKAGFEILTSNKLYTYSNFLTLILQVVASELEQEKT-VPEPMENLEERALLLRE 651

Query: 245  ALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSRMSRKGRAWWKSDSTKKRKAEDE 66
             LIL NRLAS    S  I+  +T+SRDM +LT+DV +++ RK     + DS K++  E E
Sbjct: 652  VLILFNRLASHSLYSMTILRVVTNSRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRESE 711

Query: 65   IVELARVFRSRVFASLGN 12
            +V+LA+VFR R+ + LGN
Sbjct: 712  VVDLAQVFRKRLLSYLGN 729


>ref|XP_002334518.1| predicted protein [Populus trichocarpa] gi|222872780|gb|EEF09911.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  160 bits (406), Expect = 1e-37
 Identities = 91/201 (45%), Positives = 132/201 (65%)
 Frame = -2

Query: 614 KILVSFCSACNDDPSSEATDDATTDGLTFQVFSKILEGLAECVKCRGRGTQELKLRTLAI 435
           K+L  FCS C ++  +++T++      T + FS IL GLAEC+ C G   Q+++L   AI
Sbjct: 212 KLLSIFCSGCKEEEIADSTNNKKNTS-TPKGFSSILVGLAECIACSGNSLQDIELCKRAI 270

Query: 434 VVLAFVASSGKLGFEVFLNPKMSNGANFLELILQALASELDAEAVESAKSAETCRERNLL 255
           ++LAF+ASSGK GFE+ +  K+    NFL LILQ L SE++ EA  SA+ A + + R  L
Sbjct: 271 IMLAFLASSGKFGFEIMVTHKLRGETNFLMLILQVLVSEMNVEA--SAEPARSIKARTSL 328

Query: 254 VREALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSRMSRKGRAWWKSDSTKKRKA 75
           +REALILLNRL S+   S+ ++  LT+ RDM +LT+D+ SR+S++ ++   SD     K 
Sbjct: 329 IREALILLNRLVSNTGYSAIVLRILTARRDMATLTIDIASRLSQEDQSLRLSDVNGHVK- 387

Query: 74  EDEIVELARVFRSRVFASLGN 12
           E EIVEL + F+ RVFA LG+
Sbjct: 388 ESEIVELGQAFKKRVFAYLGD 408


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