BLASTX nr result

ID: Coptis24_contig00025512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025512
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                69   8e-11
emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]    70   1e-10
emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera]    70   1e-10
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]    70   1e-10
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]    70   1e-10

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 68.9 bits (167), Expect(2) = 8e-11
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = +3

Query: 90   REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269
            +EA   P  QQAM EE SAL +T T DLVPLP GK V+G + VYK+KT+SDG++ERY+ +
Sbjct: 879  KEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKTNSDGSIERYKAR 938



 Score = 22.3 bits (46), Expect(2) = 8e-11
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 26  NYRSFLAAVHSFHEPTIWK 82
           ++ SFLA +H   EP+ +K
Sbjct: 861 SFTSFLAYIHCLFEPSSYK 879


>emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera]
          Length = 2471

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = +3

Query: 90   REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269
            REAS  P WQ AM EE  AL +  T DLVPLP G+ V+G K +YK+KT SDG++ERY+ +
Sbjct: 1126 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 1185


>emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera]
          Length = 1168

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = +3

Query: 90  REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269
           REAS  P WQ AM EE  AL +  T DLVPLP G+ V+G K +YK+KT SDG++ERY+ +
Sbjct: 666 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 725


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = +3

Query: 90   REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269
            REAS  P WQ AM EE  AL +  T DLVPLP G+ V+G K +YK+KT SDG++ERY+ +
Sbjct: 1973 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 2032


>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
          Length = 1013

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = +3

Query: 90  REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269
           REAS  P WQ AM EE  AL +  T DLVPLP G+ V+G K +YK+KT SDG++ERY+ +
Sbjct: 511 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 570


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