BLASTX nr result
ID: Coptis24_contig00025512
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025512 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 69 8e-11 emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera] 70 1e-10 emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera] 70 1e-10 emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] 70 1e-10 emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera] 70 1e-10 >emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] Length = 1382 Score = 68.9 bits (167), Expect(2) = 8e-11 Identities = 35/60 (58%), Positives = 45/60 (75%) Frame = +3 Query: 90 REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269 +EA P QQAM EE SAL +T T DLVPLP GK V+G + VYK+KT+SDG++ERY+ + Sbjct: 879 KEAILDPLGQQAMDEELSALHKTDTWDLVPLPPGKSVVGCRWVYKIKTNSDGSIERYKAR 938 Score = 22.3 bits (46), Expect(2) = 8e-11 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = +2 Query: 26 NYRSFLAAVHSFHEPTIWK 82 ++ SFLA +H EP+ +K Sbjct: 861 SFTSFLAYIHCLFEPSSYK 879 >emb|CAN74430.1| hypothetical protein VITISV_010987 [Vitis vinifera] Length = 2471 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/60 (56%), Positives = 43/60 (71%) Frame = +3 Query: 90 REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269 REAS P WQ AM EE AL + T DLVPLP G+ V+G K +YK+KT SDG++ERY+ + Sbjct: 1126 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 1185 >emb|CAN68711.1| hypothetical protein VITISV_015847 [Vitis vinifera] Length = 1168 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/60 (56%), Positives = 43/60 (71%) Frame = +3 Query: 90 REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269 REAS P WQ AM EE AL + T DLVPLP G+ V+G K +YK+KT SDG++ERY+ + Sbjct: 666 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 725 >emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera] Length = 2408 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/60 (56%), Positives = 43/60 (71%) Frame = +3 Query: 90 REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269 REAS P WQ AM EE AL + T DLVPLP G+ V+G K +YK+KT SDG++ERY+ + Sbjct: 1973 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 2032 >emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera] Length = 1013 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/60 (56%), Positives = 43/60 (71%) Frame = +3 Query: 90 REASNIPHWQQAMAEE*SALEQT*TRDLVPLPEGKKVIGLKLVYKVKTHSDGTLERYRRK 269 REAS P WQ AM EE AL + T DLVPLP G+ V+G K +YK+KT SDG++ERY+ + Sbjct: 511 REASTDPLWQIAMKEELDALTKNHTWDLVPLPPGQSVVGCKWIYKIKTRSDGSVERYKAR 570