BLASTX nr result

ID: Coptis24_contig00025511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025511
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263592.1| PREDICTED: vacuolar protein sorting-associat...    82   6e-14
ref|XP_002302194.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002263592.1| PREDICTED: vacuolar protein sorting-associated protein 45 homolog
           [Vitis vinifera] gi|302142769|emb|CBI19972.3| unnamed
           protein product [Vitis vinifera]
          Length = 568

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 52/105 (49%), Positives = 56/105 (53%)
 Frame = +1

Query: 13  MVLISAVREYIAKMLQDISGMKVLILDSQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
           MVLISAVR+Y+++MLQDISGMKVLILDSQT                              
Sbjct: 1   MVLISAVRDYMSRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISMS 60

Query: 193 XXXXXXXXXXXXXXXXXXXKESMSHLKAVYFLRPTSENIQHLRRQ 327
                              KESMSHLKAVYFLRPTSENIQHLRRQ
Sbjct: 61  -------------------KESMSHLKAVYFLRPTSENIQHLRRQ 86


>ref|XP_002302194.1| predicted protein [Populus trichocarpa] gi|222843920|gb|EEE81467.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/106 (46%), Positives = 54/106 (50%)
 Frame = +1

Query: 13  MVLISAVREYIAKMLQDISGMKVLILDSQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
           MVL+SA R+YI ++LQDISGMKVLILDSQT                              
Sbjct: 1   MVLVSAARDYINRLLQDISGMKVLILDSQTVTIVSVVYSQTELLQKEVFLVELVDSISKS 60

Query: 193 XXXXXXXXXXXXXXXXXXXKESMSHLKAVYFLRPTSENIQHLRRQI 330
                              KE MSHLKAVYFLRPTSENIQHLRRQ+
Sbjct: 61  -------------------KEPMSHLKAVYFLRPTSENIQHLRRQL 87


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