BLASTX nr result
ID: Coptis24_contig00025511
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025511 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263592.1| PREDICTED: vacuolar protein sorting-associat... 82 6e-14 ref|XP_002302194.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 >ref|XP_002263592.1| PREDICTED: vacuolar protein sorting-associated protein 45 homolog [Vitis vinifera] gi|302142769|emb|CBI19972.3| unnamed protein product [Vitis vinifera] Length = 568 Score = 81.6 bits (200), Expect = 6e-14 Identities = 52/105 (49%), Positives = 56/105 (53%) Frame = +1 Query: 13 MVLISAVREYIAKMLQDISGMKVLILDSQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192 MVLISAVR+Y+++MLQDISGMKVLILDSQT Sbjct: 1 MVLISAVRDYMSRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISMS 60 Query: 193 XXXXXXXXXXXXXXXXXXXKESMSHLKAVYFLRPTSENIQHLRRQ 327 KESMSHLKAVYFLRPTSENIQHLRRQ Sbjct: 61 -------------------KESMSHLKAVYFLRPTSENIQHLRRQ 86 >ref|XP_002302194.1| predicted protein [Populus trichocarpa] gi|222843920|gb|EEE81467.1| predicted protein [Populus trichocarpa] Length = 568 Score = 77.4 bits (189), Expect = 1e-12 Identities = 49/106 (46%), Positives = 54/106 (50%) Frame = +1 Query: 13 MVLISAVREYIAKMLQDISGMKVLILDSQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192 MVL+SA R+YI ++LQDISGMKVLILDSQT Sbjct: 1 MVLVSAARDYINRLLQDISGMKVLILDSQTVTIVSVVYSQTELLQKEVFLVELVDSISKS 60 Query: 193 XXXXXXXXXXXXXXXXXXXKESMSHLKAVYFLRPTSENIQHLRRQI 330 KE MSHLKAVYFLRPTSENIQHLRRQ+ Sbjct: 61 -------------------KEPMSHLKAVYFLRPTSENIQHLRRQL 87