BLASTX nr result

ID: Coptis24_contig00025504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025504
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus comm...    84   4e-26
ref|XP_004160109.1| PREDICTED: probable ADP-ribosylation factor ...    86   1e-25
ref|XP_004145835.1| PREDICTED: probable ADP-ribosylation factor ...    86   1e-25
gb|ACD40011.1| pollen-specific C2 domain containing protein [Nic...    89   2e-25
gb|ACD40010.1| pollen-specific C2 domain containing protein [Nic...    89   2e-25

>ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus communis]
           gi|223529983|gb|EEF31909.1| ARF GTPase activator,
           putative [Ricinus communis]
          Length = 183

 Score = 84.0 bits (206), Expect(2) = 4e-26
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +1

Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDV 402
           PEWNEDLT SV DP LP+KL VYD DTFS DDKMGDAEFDI+P++E ++ ++
Sbjct: 68  PEWNEDLTLSVIDPTLPVKLTVYDHDTFSKDDKMGDAEFDIRPYIEALRMNL 119



 Score = 58.9 bits (141), Expect(2) = 4e-26
 Identities = 27/30 (90%), Positives = 30/30 (100%)
 Frame = +3

Query: 81  NLAVRDVRSSDPYVVLKMGKQKLKTRVVKK 170
           NLAVRDVRSSDPY+V+KMGKQKLKTRV+KK
Sbjct: 35  NLAVRDVRSSDPYIVVKMGKQKLKTRVIKK 64


>ref|XP_004160109.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Cucumis sativus]
          Length = 165

 Score = 86.3 bits (212), Expect(2) = 1e-25
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = +1

Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411
           PEWNEDLT S++DP LP+ ++VYD+D FS DDKMGDAEFD++PFVE VK  + +L
Sbjct: 50  PEWNEDLTLSIQDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNL 104



 Score = 55.1 bits (131), Expect(2) = 1e-25
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 81  NLAVRDVRSSDPYVVLKMGKQKLKTRVVKK 170
           NLAVRDV SSDPYV+ KMGKQKLKTRVVK+
Sbjct: 17  NLAVRDVSSSDPYVIFKMGKQKLKTRVVKQ 46


>ref|XP_004145835.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Cucumis sativus]
          Length = 165

 Score = 86.3 bits (212), Expect(2) = 1e-25
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = +1

Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411
           PEWNEDLT S++DP LP+ ++VYD+D FS DDKMGDAEFD++PFVE VK  + +L
Sbjct: 50  PEWNEDLTLSIQDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNL 104



 Score = 55.1 bits (131), Expect(2) = 1e-25
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 81  NLAVRDVRSSDPYVVLKMGKQKLKTRVVKK 170
           NLAVRDV SSDPYV+ KMGKQKLKTRVVK+
Sbjct: 17  NLAVRDVSSSDPYVIFKMGKQKLKTRVVKQ 46


>gb|ACD40011.1| pollen-specific C2 domain containing protein [Nicotiana sp. variant
           'Rastroensis']
          Length = 188

 Score = 89.0 bits (219), Expect(2) = 2e-25
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +1

Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411
           PEWNE+LT SV DP LP+KL VYD DTFS DDKMGDAEFDIKPFVE +K ++  L
Sbjct: 73  PEWNEELTLSVSDPSLPVKLTVYDHDTFSMDDKMGDAEFDIKPFVEALKMNLDGL 127



 Score = 51.6 bits (122), Expect(2) = 2e-25
 Identities = 26/31 (83%), Positives = 29/31 (93%), Gaps = 1/31 (3%)
 Frame = +3

Query: 81  NLAVRDVRSSDPYVVLKMG-KQKLKTRVVKK 170
           NLAVRDVR+SDPY V+KMG KQKLKTRV+KK
Sbjct: 39  NLAVRDVRTSDPYCVVKMGKKQKLKTRVIKK 69


>gb|ACD40010.1| pollen-specific C2 domain containing protein [Nicotiana alata]
           gi|187942407|gb|ACD40012.1| pollen-specific C2 domain
           containing protein [Nicotiana forgetiana]
           gi|187942409|gb|ACD40013.1| pollen-specific C2 domain
           containing protein [Nicotiana langsdorffii]
           gi|187942411|gb|ACD40014.1| pollen-specific C2 domain
           containing protein [Nicotiana mutabilis]
           gi|187942415|gb|ACD40016.1| pollen-specific C2 domain
           containing protein [Nicotiana longiflora]
          Length = 187

 Score = 89.0 bits (219), Expect(2) = 2e-25
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = +1

Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411
           PEWNE+LT SV DP LP+KL VYD DTFS DDKMGDAEFDIKPFVE +K ++  L
Sbjct: 72  PEWNEELTLSVSDPSLPVKLTVYDHDTFSMDDKMGDAEFDIKPFVEALKMNLDGL 126



 Score = 51.6 bits (122), Expect(2) = 2e-25
 Identities = 26/31 (83%), Positives = 29/31 (93%), Gaps = 1/31 (3%)
 Frame = +3

Query: 81  NLAVRDVRSSDPYVVLKMG-KQKLKTRVVKK 170
           NLAVRDVR+SDPY V+KMG KQKLKTRV+KK
Sbjct: 38  NLAVRDVRTSDPYCVVKMGKKQKLKTRVIKK 68


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