BLASTX nr result
ID: Coptis24_contig00025504
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025504 (413 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus comm... 84 4e-26 ref|XP_004160109.1| PREDICTED: probable ADP-ribosylation factor ... 86 1e-25 ref|XP_004145835.1| PREDICTED: probable ADP-ribosylation factor ... 86 1e-25 gb|ACD40011.1| pollen-specific C2 domain containing protein [Nic... 89 2e-25 gb|ACD40010.1| pollen-specific C2 domain containing protein [Nic... 89 2e-25 >ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus communis] gi|223529983|gb|EEF31909.1| ARF GTPase activator, putative [Ricinus communis] Length = 183 Score = 84.0 bits (206), Expect(2) = 4e-26 Identities = 36/52 (69%), Positives = 44/52 (84%) Frame = +1 Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDV 402 PEWNEDLT SV DP LP+KL VYD DTFS DDKMGDAEFDI+P++E ++ ++ Sbjct: 68 PEWNEDLTLSVIDPTLPVKLTVYDHDTFSKDDKMGDAEFDIRPYIEALRMNL 119 Score = 58.9 bits (141), Expect(2) = 4e-26 Identities = 27/30 (90%), Positives = 30/30 (100%) Frame = +3 Query: 81 NLAVRDVRSSDPYVVLKMGKQKLKTRVVKK 170 NLAVRDVRSSDPY+V+KMGKQKLKTRV+KK Sbjct: 35 NLAVRDVRSSDPYIVVKMGKQKLKTRVIKK 64 >ref|XP_004160109.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11-like [Cucumis sativus] Length = 165 Score = 86.3 bits (212), Expect(2) = 1e-25 Identities = 36/55 (65%), Positives = 46/55 (83%) Frame = +1 Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411 PEWNEDLT S++DP LP+ ++VYD+D FS DDKMGDAEFD++PFVE VK + +L Sbjct: 50 PEWNEDLTLSIQDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNL 104 Score = 55.1 bits (131), Expect(2) = 1e-25 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 81 NLAVRDVRSSDPYVVLKMGKQKLKTRVVKK 170 NLAVRDV SSDPYV+ KMGKQKLKTRVVK+ Sbjct: 17 NLAVRDVSSSDPYVIFKMGKQKLKTRVVKQ 46 >ref|XP_004145835.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11-like [Cucumis sativus] Length = 165 Score = 86.3 bits (212), Expect(2) = 1e-25 Identities = 36/55 (65%), Positives = 46/55 (83%) Frame = +1 Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411 PEWNEDLT S++DP LP+ ++VYD+D FS DDKMGDAEFD++PFVE VK + +L Sbjct: 50 PEWNEDLTLSIQDPSLPVNVLVYDKDLFSLDDKMGDAEFDVRPFVEAVKMRLNNL 104 Score = 55.1 bits (131), Expect(2) = 1e-25 Identities = 26/30 (86%), Positives = 28/30 (93%) Frame = +3 Query: 81 NLAVRDVRSSDPYVVLKMGKQKLKTRVVKK 170 NLAVRDV SSDPYV+ KMGKQKLKTRVVK+ Sbjct: 17 NLAVRDVSSSDPYVIFKMGKQKLKTRVVKQ 46 >gb|ACD40011.1| pollen-specific C2 domain containing protein [Nicotiana sp. variant 'Rastroensis'] Length = 188 Score = 89.0 bits (219), Expect(2) = 2e-25 Identities = 40/55 (72%), Positives = 45/55 (81%) Frame = +1 Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411 PEWNE+LT SV DP LP+KL VYD DTFS DDKMGDAEFDIKPFVE +K ++ L Sbjct: 73 PEWNEELTLSVSDPSLPVKLTVYDHDTFSMDDKMGDAEFDIKPFVEALKMNLDGL 127 Score = 51.6 bits (122), Expect(2) = 2e-25 Identities = 26/31 (83%), Positives = 29/31 (93%), Gaps = 1/31 (3%) Frame = +3 Query: 81 NLAVRDVRSSDPYVVLKMG-KQKLKTRVVKK 170 NLAVRDVR+SDPY V+KMG KQKLKTRV+KK Sbjct: 39 NLAVRDVRTSDPYCVVKMGKKQKLKTRVIKK 69 >gb|ACD40010.1| pollen-specific C2 domain containing protein [Nicotiana alata] gi|187942407|gb|ACD40012.1| pollen-specific C2 domain containing protein [Nicotiana forgetiana] gi|187942409|gb|ACD40013.1| pollen-specific C2 domain containing protein [Nicotiana langsdorffii] gi|187942411|gb|ACD40014.1| pollen-specific C2 domain containing protein [Nicotiana mutabilis] gi|187942415|gb|ACD40016.1| pollen-specific C2 domain containing protein [Nicotiana longiflora] Length = 187 Score = 89.0 bits (219), Expect(2) = 2e-25 Identities = 40/55 (72%), Positives = 45/55 (81%) Frame = +1 Query: 247 PEWNEDLTFSVEDPILPIKLIVYDRDTFSFDDKMGDAEFDIKPFVEVVKKDVPDL 411 PEWNE+LT SV DP LP+KL VYD DTFS DDKMGDAEFDIKPFVE +K ++ L Sbjct: 72 PEWNEELTLSVSDPSLPVKLTVYDHDTFSMDDKMGDAEFDIKPFVEALKMNLDGL 126 Score = 51.6 bits (122), Expect(2) = 2e-25 Identities = 26/31 (83%), Positives = 29/31 (93%), Gaps = 1/31 (3%) Frame = +3 Query: 81 NLAVRDVRSSDPYVVLKMG-KQKLKTRVVKK 170 NLAVRDVR+SDPY V+KMG KQKLKTRV+KK Sbjct: 38 NLAVRDVRTSDPYCVVKMGKKQKLKTRVIKK 68