BLASTX nr result

ID: Coptis24_contig00025454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025454
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18200.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-...   110   2e-22
ref|XP_002300920.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
gb|AEV53413.1| SANT DNA-binding domain-containing protein [Popul...   108   6e-22
ref|XP_002532428.1| hypothetical protein RCOM_0453340 [Ricinus c...   105   4e-21

>emb|CBI18200.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/102 (51%), Positives = 75/102 (73%)
 Frame = +3

Query: 9   EKSGYTKRKWSTLFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNR 188
           E+ G  KRKW   F+ L+++V+ +QE  Q +FL+ +E+ EH+ M REEAWK QEM R+NR
Sbjct: 170 ERRGKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQEMARMNR 229

Query: 189 EHETLVEERLAATTRNAAVIAFLEKVSEQKDSPLSMERTVDN 314
           EHE LV+ER  A  ++AAVIAFL+K+SEQ+ +P+   R +DN
Sbjct: 230 EHELLVQERSIAAAKDAAVIAFLQKISEQQ-NPVLEPRKMDN 270


>ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
          Length = 576

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/91 (53%), Positives = 69/91 (75%)
 Frame = +3

Query: 9   EKSGYTKRKWSTLFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNR 188
           E+ G  KRKW   F+ L+++V+ +QE  Q +FL+ +E+ EH+ M REEAWK QEM R+NR
Sbjct: 245 ERRGKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQEMARMNR 304

Query: 189 EHETLVEERLAATTRNAAVIAFLEKVSEQKD 281
           EHE LV+ER  A  ++AAVIAFL+K+SEQ++
Sbjct: 305 EHELLVQERSIAAAKDAAVIAFLQKISEQQN 335


>ref|XP_002300920.1| predicted protein [Populus trichocarpa] gi|222842646|gb|EEE80193.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/97 (53%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
 Frame = +3

Query: 21  YTKRK----WSTLFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNR 188
           Y KRK    W   FE L  +V++KQE  Q +FL+T+E+ EHE MAREEAW+ QEM R+NR
Sbjct: 263 YKKRKRESNWKDFFERLTRDVIKKQEDLQEKFLETIEKYEHERMAREEAWRMQEMARINR 322

Query: 189 EHETLVEERLAATTRNAAVIAFLEKVSEQKDSPLSME 299
           EHETL++ER  A  ++AAV+AFL+K+S Q++S  + E
Sbjct: 323 EHETLIQERSTAAAKDAAVVAFLQKISGQQNSVQTQE 359


>gb|AEV53413.1| SANT DNA-binding domain-containing protein [Populus tomentosa]
          Length = 591

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/97 (52%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
 Frame = +3

Query: 21  YTKRK----WSTLFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNR 188
           Y KRK    W   FE L  +V++KQE  Q +FL+T+E+ EHE MAREEAW+ QEM R+NR
Sbjct: 263 YKKRKRESNWKDFFERLTRDVIKKQEDLQEKFLETIEKYEHERMAREEAWRMQEMARINR 322

Query: 189 EHETLVEERLAATTRNAAVIAFLEKVSEQKDSPLSME 299
           EHE L++ER  A  ++AAV+AFL+K+S Q++S  + E
Sbjct: 323 EHEALIQERSTAAAKDAAVVAFLQKISGQQNSVQTQE 359


>ref|XP_002532428.1| hypothetical protein RCOM_0453340 [Ricinus communis]
           gi|223527848|gb|EEF29943.1| hypothetical protein
           RCOM_0453340 [Ricinus communis]
          Length = 649

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/86 (53%), Positives = 67/86 (77%)
 Frame = +3

Query: 27  KRKWSTLFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNREHETLV 206
           KR+W   FE L ++V++KQE  Q +FL+T+E+ EHE +AREE W+ QEM R+NREHE L+
Sbjct: 282 KRRWKDFFERLTKDVIKKQEELQRKFLETVEKREHERIAREETWRMQEMARINREHEILI 341

Query: 207 EERLAATTRNAAVIAFLEKVSEQKDS 284
           +ER  A  ++A+VIAFL+K+S Q++S
Sbjct: 342 QERTTAAAKDASVIAFLQKISGQQNS 367


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