BLASTX nr result

ID: Coptis24_contig00025446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025446
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802...    96   4e-18
ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775...    95   5e-18
ref|XP_003550103.1| PREDICTED: uncharacterized protein LOC100775...    95   5e-18
ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...    94   9e-18

>ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|222874919|gb|EEF12050.1|
            predicted protein [Populus trichocarpa]
          Length = 987

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/67 (70%), Positives = 54/67 (80%)
 Frame = +2

Query: 2    GGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFARLSGLGSDMELN 181
            GGSTGFCD+K+ FAIAVTLNKMSLG  T +I+Q VCSELNVPLP+EFA LS    D EL+
Sbjct: 921  GGSTGFCDIKNRFAIAVTLNKMSLGTATRRIVQFVCSELNVPLPDEFAVLSETAPDEELS 980

Query: 182  FDKPLIN 202
              +PLIN
Sbjct: 981  IARPLIN 987


>ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802638 [Glycine max]
          Length = 965

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2    GGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFAR--LSGLGSDME 175
            GGSTGFCDV +NF+IAVTLNKMS GGVTGKI+QLVCSELN+P+P++F R  +   G D +
Sbjct: 897  GGSTGFCDVTNNFSIAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDFLRFAVEQSGPDEQ 956

Query: 176  LNFDKPLIN 202
            L+  +P+IN
Sbjct: 957  LSMGRPIIN 965


>ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775929 isoform 2 [Glycine
            max]
          Length = 994

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/69 (63%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2    GGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFAR--LSGLGSDME 175
            GGSTGFCDV +NF++AVTLNKMS GGVTGKI+QLVCSELN+P+P++F R  +   G D +
Sbjct: 926  GGSTGFCDVTNNFSVAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDFLRFAVEQSGPDEQ 985

Query: 176  LNFDKPLIN 202
            L+  +P+IN
Sbjct: 986  LSMGRPIIN 994


>ref|XP_003550103.1| PREDICTED: uncharacterized protein LOC100775929 isoform 1 [Glycine
            max]
          Length = 966

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/69 (63%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2    GGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFAR--LSGLGSDME 175
            GGSTGFCDV +NF++AVTLNKMS GGVTGKI+QLVCSELN+P+P++F R  +   G D +
Sbjct: 898  GGSTGFCDVTNNFSVAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDFLRFAVEQSGPDEQ 957

Query: 176  LNFDKPLIN 202
            L+  +P+IN
Sbjct: 958  LSMGRPIIN 966


>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
            gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
            protein coq-8, putative [Ricinus communis]
          Length = 965

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = +2

Query: 2    GGSTGFCDVKHNFAIAVTLNKMSLGGVTGKIMQLVCSELNVPLPEEFARLSGLGSDMELN 181
            GGSTGFCD+K+ FAIAVT+NK+S+G VT KI +LVCSE+NVPLPEE +     G D+ELN
Sbjct: 899  GGSTGFCDIKNRFAIAVTVNKLSVGFVTRKIAELVCSEVNVPLPEELSISGERGPDLELN 958

Query: 182  FDKPLIN 202
              KPLIN
Sbjct: 959  IGKPLIN 965


Top