BLASTX nr result

ID: Coptis24_contig00025437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025437
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522353.1| conserved hypothetical protein [Ricinus comm...   164   3e-44
ref|XP_002306450.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35
ref|XP_003519917.1| PREDICTED: uncharacterized protein LOC100812...   145   2e-32
ref|XP_004148058.1| PREDICTED: uncharacterized protein LOC101211...   142   9e-32
gb|AFW66799.1| hypothetical protein ZEAMMB73_324298 [Zea mays]        121   2e-25

>ref|XP_002522353.1| conserved hypothetical protein [Ricinus communis]
            gi|223538431|gb|EEF40037.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 535

 Score =  164 bits (415), Expect(2) = 3e-44
 Identities = 101/288 (35%), Positives = 144/288 (50%), Gaps = 11/288 (3%)
 Frame = +3

Query: 3    ELAKVYMTFVDC-LTNVPGELLNVMYVAQINESQMSSCK-----DVFLHGDXXXXXXXXX 164
            EL + Y   V   L+NVP + ++ + V+Q +E++ S  +     D     +         
Sbjct: 187  ELREAYFGSVHSFLSNVPCDFMDEIQVSQSSETKESDAQNNHFMDALFLKNVGEQQKKIV 246

Query: 165  XXXXXXXXXXXXIHESSSTEV--GTFDEHPIFGKLTNLVPKLLHWCFREPKESNWTCSFR 338
                        + +S   EV  G+ D HP+   +T+ VPK++  C             +
Sbjct: 247  FLGNFIQLLCSLVEQSCDVEVKVGSQDHHPVLCLITSFVPKVVSCCLGGQGNCVSASVSQ 306

Query: 339  YLRHKMLMIMIRLSFHIHREFNLLVLWLQLVHKYFEDLLHQPISGCHADQDDCLEGSPFI 518
            Y RHK+LM+M+RLS+    ++  L+ WLQL+H YFE LL +PI      QD+ LE SPF+
Sbjct: 307  YFRHKLLMLMLRLSYQTCLDYFTLISWLQLLHDYFEVLLWKPIIKLEFPQDESLEDSPFL 366

Query: 519  PCVVDGG-NRISISHLQRQAIFLFLKCSISLISL--DKGTKCSCALSNSCLTSKFQYGQD 689
              + DG  + I+  HLQR AI LFL+C   LISL  DK  KC+C   N C         D
Sbjct: 367  SSLSDGDIHGINSHHLQRWAILLFLRCCFGLISLTRDKSKKCTCGTLNCCSGYSIS-DMD 425

Query: 690  CCALNKGLSQLSEWINRHVPLDKVVDYEMYIESCASFALSLLKLYMDE 833
            CC   KG  ++ +W+  H P+D  V  EMY E C  F  S L+LYM E
Sbjct: 426  CCGRKKGFLEIYKWLQGHFPIDMSVGQEMYFEKCIGFTFSFLQLYMHE 473



 Score = 41.2 bits (95), Expect(2) = 3e-44
 Identities = 16/26 (61%), Positives = 23/26 (88%)
 Frame = +1

Query: 865 ELKGDILYHLSNVLNPVCLFHIFLAE 942
           ++K DIL+H+S++ NPV LFH+FLAE
Sbjct: 504 DVKEDILFHISHIFNPVYLFHLFLAE 529


>ref|XP_002306450.1| predicted protein [Populus trichocarpa] gi|222855899|gb|EEE93446.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  154 bits (389), Expect = 3e-35
 Identities = 97/270 (35%), Positives = 145/270 (53%), Gaps = 13/270 (4%)
 Frame = +3

Query: 3   ELAKVYMTFVDC-LTNVPGELLNVMYVAQI-----NESQMSSCKDVFLHGDXXXXXXXXX 164
           +L +VY+  V   L+NVP E ++ ++V Q       + Q    KD  +            
Sbjct: 188 QLLEVYLGSVSSFLSNVPWESMDEIHVDQSCDAWDGDPQNCCSKDASVFRSFGAKEPKVL 247

Query: 165 XXXXXXXXXXXXIHESSS--TEVGTFDEHPIFGKLTNLVPKLLHWCFREPKESNWTCSFR 338
                       + +SS+  TEVG+  ++P+   + +LVPKL  WC  +  +S      +
Sbjct: 248 FLGIFIQFLCSLVEQSSAVETEVGSQVQYPVLSMVISLVPKLACWCLCKKGKSVKLSVSQ 307

Query: 339 YLRHKMLMIMIRLSFHIHREFNLLVLWLQLVHKYFEDLLHQPISGCHADQDDCLEGSPFI 518
           Y RHK+LM+M+R+S+      + L+LWLQL+H+YFE+LL +PIS   A QD+CLEGSPF+
Sbjct: 308 YFRHKLLMLMLRISYVTCLGCSTLILWLQLLHEYFEELLQKPISKLEAGQDECLEGSPFL 367

Query: 519 PCVVDGG-NRISISHLQRQAIFLFLKCSISLISLDKGTKCSCALS----NSCLTSKFQYG 683
             + +G  + +   HLQRQ + LFL+C  SL+S    T   C  S     SCLT      
Sbjct: 368 LGLSNGELDGMHSFHLQRQTLLLFLRCCFSLMSFTGETSKQCVTSKTILKSCLTVASVSD 427

Query: 684 QDCCALNKGLSQLSEWINRHVPLDKVVDYE 773
            D C+ NKGL +L  W+  H+P D +VD+E
Sbjct: 428 LDYCSRNKGLLELYNWLQGHLPDDILVDHE 457


>ref|XP_003519917.1| PREDICTED: uncharacterized protein LOC100812484 [Glycine max]
          Length = 639

 Score =  145 bits (365), Expect = 2e-32
 Identities = 91/284 (32%), Positives = 148/284 (52%), Gaps = 8/284 (2%)
 Frame = +3

Query: 6    LAKVYMTFVD-CLTNVPGELLNVMYVAQINESQMSSCKDVFLHGDXXXXXXXXXXXXXXX 182
            L KVY   V+ CL  +P +LL+  + ++    + +S  +     +               
Sbjct: 202  LIKVYYDSVNSCLLKMPWDLLDEYWSSEFGRMKDNSTINQLHLKNFSVMDPVMNFLGTFL 261

Query: 183  XXXXXXIHESSSTEVG--TFDEHPIFGKLTNLVPKLLHWCFREPKESNWTCSFRYLRHKM 356
                  ++ + S E G  + D+HP+F  + NL+P+L  WC  E + +    +  YL+HK+
Sbjct: 262  QLLCSLVYRNDSVETGCDSVDKHPLFLTVVNLIPRLAKWCLSEQENNAEMHAIHYLKHKL 321

Query: 357  LMIMIRLSFHIHREFNLLVLWLQLVHKYFEDLLHQPISGCHADQDDCLEGSPFIPCVVDG 536
            L++MIRL      +  + + WL+L+H YF++LL QP++   +DQ DCLE SPF+  + DG
Sbjct: 322  LILMIRLGSLTGLDCRIRLSWLELLHNYFQELLQQPLTQFLSDQIDCLEDSPFLWSLCDG 381

Query: 537  GNRISIS-HLQRQAIFLFLKCSISLISLDKGTKCSCALSNSCLTSKFQYG----QDCCAL 701
               +  S HL+RQA++L L CS SLI   K  + +   +NS L S F        D    
Sbjct: 382  EACMKRSDHLRRQAVYLLLACSFSLIC--KRGEIANHCNNSTLCSSFTTNPDSEHDYFCR 439

Query: 702  NKGLSQLSEWINRHVPLDKVVDYEMYIESCASFALSLLKLYMDE 833
             KG  +L +WI  H+P    +++E Y++ C +F  S L+LY+ E
Sbjct: 440  KKGSLELFKWILGHLPTAISINHEKYMQMCMNFISSFLQLYLRE 483


>ref|XP_004148058.1| PREDICTED: uncharacterized protein LOC101211532 [Cucumis sativus]
          Length = 523

 Score =  142 bits (359), Expect = 9e-32
 Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
 Frame = +3

Query: 228 GTFDEHPIFGKLTNLVPKLLHWCFREPKESNWTCSFRYLRHKMLMIMIRLSFHIHREFNL 407
           G+F  HP+ G + NL+P L  WC     +    C  RY  HK+L++MIRLSFH H + + 
Sbjct: 291 GSFKSHPLLGTIINLIPNLFDWCLNNQVDHFDRCLSRYFSHKLLILMIRLSFHCHLQCST 350

Query: 408 LVLWLQLVHKYFEDLLHQPISGCHADQDDCLEGSPFIPCVVDGGNRISISHLQRQAIFLF 587
           LVLWLQL    F++LL  P     +  D  LE SP I             HL+R A+FLF
Sbjct: 351 LVLWLQLCRNCFQNLLLLPKLELESTADTSLEDSPLIVSYFGDKRSPCSLHLRRLAVFLF 410

Query: 588 LKCSISLISLDKGTKC--SCALSNSCL--TSKFQYGQDCCALNKGLSQLSEWINRHVPLD 755
           L+CS+S I      KC  S A+ +  +  T+      DC    KG+ +L +W+  ++P +
Sbjct: 411 LRCSLSFICKQPTEKCDPSIAIKSQLIYTTTLESKCDDCTCSKKGVLELYKWLLGNLPTN 470

Query: 756 KVVDYEMYIESCASFALSLLKLYMDE 833
             +D  MY ++C  FA S L+LYM E
Sbjct: 471 IFLDTNMYAKNCTKFASSFLQLYMHE 496


>gb|AFW66799.1| hypothetical protein ZEAMMB73_324298 [Zea mays]
          Length = 503

 Score =  121 bits (304), Expect = 2e-25
 Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 4/203 (1%)
 Frame = +3

Query: 237 DEHPIFGKLTNLVPKLLHWCFREPKESNWTCSFRYLRHKMLMIMIRLSFHIHREFNLLVL 416
           D   +F KL ++VPK+         + + +  ++YL+HK+LM+M+RL  +I ++ + +V 
Sbjct: 288 DGQDMFVKLVDVVPKIASLSLGGQHDGSKSL-YQYLKHKILMVMMRLKPYIQQDCSHIVS 346

Query: 417 WLQLVHKYFEDLLHQPISGCHADQDDCLEGSPFIPCVVD--GGNRISISHLQRQAIFLFL 590
           WL+L+ +YF DLLHQPIS   A  ++CLE SPF+  +VD       S  HLQRQAI+LFL
Sbjct: 347 WLKLLRRYFGDLLHQPISQHIAKPENCLEDSPFLLDMVDLVESQDKSTRHLQRQAIYLFL 406

Query: 591 KCSISLI--SLDKGTKCSCALSNSCLTSKFQYGQDCCALNKGLSQLSEWINRHVPLDKVV 764
            CSI L     D   +CSC      L  K Q   + C    GLS++S+W  +   L+  +
Sbjct: 407 SCSICLSYNRNDGALQCSCKRDECLLGHKVQGCSNHCNC-FGLSEISDWFQK-CYLNGSI 464

Query: 765 DYEMYIESCASFALSLLKLYMDE 833
           D        +SFALS L+LYM+E
Sbjct: 465 D-----SKSSSFALSFLELYMEE 482


Top