BLASTX nr result

ID: Coptis24_contig00025428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025428
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30461.3| unnamed protein product [Vitis vinifera]              155   2e-35
ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245...   155   2e-35
emb|CBI16031.3| unnamed protein product [Vitis vinifera]              132   1e-28
emb|CAN70168.1| hypothetical protein VITISV_006870 [Vitis vinifera]   132   1e-28
ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus c...   130   8e-28

>emb|CBI30461.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score =  155 bits (391), Expect = 2e-35
 Identities = 103/250 (41%), Positives = 136/250 (54%), Gaps = 3/250 (1%)
 Frame = -1

Query: 802 MGYQADLRKNSRCPQTSRTVAEKISSTRAAQIVRVQDQLKLEKPISKSYGDLHHEIKQTL 623
           MGY  +L+ +SR  QTS+ V EK  S +A Q ++ QD+ K+E  I    GDLH  ++Q +
Sbjct: 1   MGYSLELKSSSRQHQTSKIVKEKFQSPQANQSLKFQDKFKVENSI----GDLHTIVRQNV 56

Query: 622 GDGPLFPRKSPRNCQKQSVEGKS-KDDELVKHMSNLPRYLQRVEGGENPQEKVLNFGVLD 446
            +G LF RK     QKQ    K+ KDDELVKHMSNLP YLQR+E GEN QEK LNFGVLD
Sbjct: 57  NEGSLFQRKFSAGHQKQHTSRKATKDDELVKHMSNLPGYLQRIEKGENLQEKALNFGVLD 116

Query: 445 WGRLEKWKYNQNAVPQR-SVMYXXXXXXXXXXXXXXXXXXXXXXXXXXXLANRKRSPSRS 269
           W  LEKWK+NQ  VP+R S                              + + K+  S  
Sbjct: 117 WESLEKWKHNQKHVPERGSTNASSTGCNSSLVSSIGSSTLSSRDQNGTRIRHSKQHLSPC 176

Query: 268 AHVTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQ-KLSGTDLSSRRSHSKMKFE 92
           ++++SS K   S G K     +  L+D    S NS++GRQ KL  TD    RS+S+   +
Sbjct: 177 SNISSSHKGDLSQGAKLARGKVTCLKD-FETSPNSNLGRQRKLHYTDKPFSRSYSETLRK 235

Query: 91  KGMKNDINSK 62
              K D++ K
Sbjct: 236 ---KKDVDQK 242


>ref|XP_002273340.1| PREDICTED: uncharacterized protein LOC100245981 [Vitis vinifera]
          Length = 897

 Score =  155 bits (391), Expect = 2e-35
 Identities = 103/250 (41%), Positives = 136/250 (54%), Gaps = 3/250 (1%)
 Frame = -1

Query: 802 MGYQADLRKNSRCPQTSRTVAEKISSTRAAQIVRVQDQLKLEKPISKSYGDLHHEIKQTL 623
           MGY  +L+ +SR  QTS+ V EK  S +A Q ++ QD+ K+E  I    GDLH  ++Q +
Sbjct: 1   MGYSLELKSSSRQHQTSKIVKEKFQSPQANQSLKFQDKFKVENSI----GDLHTIVRQNV 56

Query: 622 GDGPLFPRKSPRNCQKQSVEGKS-KDDELVKHMSNLPRYLQRVEGGENPQEKVLNFGVLD 446
            +G LF RK     QKQ    K+ KDDELVKHMSNLP YLQR+E GEN QEK LNFGVLD
Sbjct: 57  NEGSLFQRKFSAGHQKQHTSRKATKDDELVKHMSNLPGYLQRIEKGENLQEKALNFGVLD 116

Query: 445 WGRLEKWKYNQNAVPQR-SVMYXXXXXXXXXXXXXXXXXXXXXXXXXXXLANRKRSPSRS 269
           W  LEKWK+NQ  VP+R S                              + + K+  S  
Sbjct: 117 WESLEKWKHNQKHVPERGSTNASSTGCNSSLVSSIGSSTLSSRDQNGTRIRHSKQHLSPC 176

Query: 268 AHVTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQ-KLSGTDLSSRRSHSKMKFE 92
           ++++SS K   S G K     +  L+D    S NS++GRQ KL  TD    RS+S+   +
Sbjct: 177 SNISSSHKGDLSQGAKLARGKVTCLKD-FETSPNSNLGRQRKLHYTDKPFSRSYSETLRK 235

Query: 91  KGMKNDINSK 62
              K D++ K
Sbjct: 236 ---KKDVDQK 242


>emb|CBI16031.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  132 bits (333), Expect = 1e-28
 Identities = 96/249 (38%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
 Frame = -1

Query: 802 MGYQADLRKNSRCPQTSRTVAEKISSTRAAQIVRVQDQLKLEKPISKSYGDLHHEIKQTL 623
           M +  +L+  SR  Q     AEKI S + +Q  +V D+LK EK  + SY DLHHEI +++
Sbjct: 1   MEHHLELKSISRNQQILGK-AEKILSPQVSQSKKVGDRLKSEK-FNLSYADLHHEITKSV 58

Query: 622 GDGPLFPRKSPRNCQKQSVEGKS-KDDELVKHMSNLPRYLQRVEGGENPQEKVLNFGVLD 446
            +  + P KS  N  KQ VEGK+ +D+ELVK+MSNLP YL+R    EN QEK L+FGVLD
Sbjct: 59  DN--ILP-KSLGNHLKQRVEGKATEDEELVKYMSNLPSYLER---RENFQEKALSFGVLD 112

Query: 445 WGRLEKWKYNQNAVPQRSVMYXXXXXXXXXXXXXXXXXXXXXXXXXXXLANRK-RSPSRS 269
           WGRLEKW+Y+   +P +S  +                              ++ R P+  
Sbjct: 113 WGRLEKWQYDHKQIPNKSGRHSSSSSNSSSLFSTDESSTHSSGGHSCSPTRQRIRRPTLQ 172

Query: 268 AHVTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQKLSGTDLSSRRSHSKMKFEK 89
           +H+ +SP E  S GVK    N G  QD  + S     G+Q+   T+ SS +  S++K EK
Sbjct: 173 SHLKASPAEGFSEGVKFFGGNAGKFQDLNAPSGTPFSGQQRFIKTNQSSCQIQSEIKLEK 232

Query: 88  GMKNDINSK 62
              N  N K
Sbjct: 233 CKINSSNPK 241


>emb|CAN70168.1| hypothetical protein VITISV_006870 [Vitis vinifera]
          Length = 922

 Score =  132 bits (333), Expect = 1e-28
 Identities = 96/249 (38%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
 Frame = -1

Query: 802 MGYQADLRKNSRCPQTSRTVAEKISSTRAAQIVRVQDQLKLEKPISKSYGDLHHEIKQTL 623
           M +  +L+  SR  Q     AEKI S + +Q  +V D+LK EK  + SY DLHHEI +++
Sbjct: 1   MEHHLELKSISRNQQIXGK-AEKILSPQVSQSKKVGDRLKSEK-FNLSYADLHHEITKSV 58

Query: 622 GDGPLFPRKSPRNCQKQSVEGKS-KDDELVKHMSNLPRYLQRVEGGENPQEKVLNFGVLD 446
            +  + P KS  N  KQ VEGK+ +D+ELVK+MSNLP YL+R    EN QEK L+FGVLD
Sbjct: 59  DN--ILP-KSLGNHLKQRVEGKATEDEELVKYMSNLPSYLER---RENFQEKALSFGVLD 112

Query: 445 WGRLEKWKYNQNAVPQRSVMYXXXXXXXXXXXXXXXXXXXXXXXXXXXLANRK-RSPSRS 269
           WGRLEKW+Y+   +P +S  +                              ++ R P+  
Sbjct: 113 WGRLEKWQYDHKQIPNKSGRHSSSSSNSSSLFSTDESSTHSSGGHSCSPXRQRIRRPTLQ 172

Query: 268 AHVTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQKLSGTDLSSRRSHSKMKFEK 89
           +H+ +SP E  S GVK    N G  QD  + S     G+Q+   T+ SS +  S++K EK
Sbjct: 173 SHLKASPAEGFSEGVKFFGGNAGKFQDLNAPSGTPFSGQQRFIKTNQSSCQIQSEIKLEK 232

Query: 88  GMKNDINSK 62
              N  N K
Sbjct: 233 CKINSSNPK 241


>ref|XP_002534178.1| hypothetical protein RCOM_0303160 [Ricinus communis]
           gi|223525738|gb|EEF28202.1| hypothetical protein
           RCOM_0303160 [Ricinus communis]
          Length = 937

 Score =  130 bits (326), Expect = 8e-28
 Identities = 86/248 (34%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
 Frame = -1

Query: 802 MGYQADLRKNSRCPQTSRTVAEKISSTRAAQIVRVQDQLKLEKPISKSYGDLHHEIKQTL 623
           MG   D++K+S+  Q S+ V E +  T+A Q ++ QD LK +  ISK Y  +  E+KQ  
Sbjct: 17  MGVGVDMKKSSKQQQYSKAVKETVLPTQAMQSLKHQDMLKAKGYISKPYSGVPCELKQNP 76

Query: 622 GDGPLFPRKSPRNCQKQSVEGK-SKDDELVKHMSNLPRYLQRVEGGENPQEKVLNFGVLD 446
            +G L   K   NCQ+ +V  K SKDDELVK+MS+LP YLQR+E  EN Q+K LN GVLD
Sbjct: 77  NNGTLIQPKPSGNCQQLAVMVKASKDDELVKYMSSLPHYLQRMEKTENIQDKALNVGVLD 136

Query: 445 WGRLEKWKYNQNAVPQRSVMYXXXXXXXXXXXXXXXXXXXXXXXXXXXLANRKRSPSRSA 266
           WGRLE WK +Q  +  R                               L +  +      
Sbjct: 137 WGRLENWKCSQKGIVLRDGNDASLPSSNLSTKMTARPPTVYSPTHNQTLTSESKLRPPPC 196

Query: 265 HVTSSPKESRSMGVKPTTPNIGALQDTISASTNSSVGRQKLSGTDLSSRRSHSKMKFEKG 86
              SS  +  S   K + P  G +QD  +AS +   G+++         RS S+  F KG
Sbjct: 197 RNNSSHNDGISRNTKSSFPEAGLVQDLENASRSHFHGQKRALWNHKYFDRSSSQTVFRKG 256

Query: 85  MKNDINSK 62
            + +++ K
Sbjct: 257 EQRELDHK 264


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