BLASTX nr result

ID: Coptis24_contig00025415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025415
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002280713.1| PREDICTED: probable tRNA threonylcarbamoylad...   113   2e-23
ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380...   111   8e-23
ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative ...   110   1e-22
ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp....   110   2e-22

>ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|222860825|gb|EEE98367.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  113 bits (283), Expect = 2e-23
 Identities = 49/60 (81%), Positives = 55/60 (91%)
 Frame = -1

Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360
           GVMVAWTGIEHF  GRFDPPP ADE +DY++DLRPRWPLGEEYAEGRS+ARS+R AR+HP
Sbjct: 392 GVMVAWTGIEHFCMGRFDPPPPADEHEDYMYDLRPRWPLGEEYAEGRSEARSLRTARIHP 451


>ref|XP_002280713.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis
           protein osgepl1 [Vitis vinifera]
           gi|296089195|emb|CBI38898.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score =  113 bits (282), Expect = 2e-23
 Identities = 47/60 (78%), Positives = 56/60 (93%)
 Frame = -1

Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360
           GVMVAWTG+EHF  GR+DPPP A+EP+DYV+DLRPRWPLGEEY+EGRS+ARS+R AR+HP
Sbjct: 395 GVMVAWTGLEHFRMGRYDPPPPANEPEDYVYDLRPRWPLGEEYSEGRSEARSLRTARIHP 454


>ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380780|gb|AAL36220.1|
           putative O-sialoglycoprotein endopeptidase [Arabidopsis
           thaliana] gi|18460924|gb|AAK00530.1| sialoglycoprotease
           GCP1 [Arabidopsis thaliana] gi|20196913|gb|AAB82636.2|
           putative O-sialoglycoprotein endopeptidase [Arabidopsis
           thaliana] gi|21436377|gb|AAM51358.1| putative
           O-sialoglycoprotein endopeptidase [Arabidopsis thaliana]
           gi|330255438|gb|AEC10532.1| glycoprotease 1 [Arabidopsis
           thaliana]
          Length = 480

 Score =  111 bits (277), Expect = 8e-23
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = -1

Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360
           GVMVAWTG+EHF  GR+DPPP A EP+DYV+DLRPRWPLGEEYA+GRS+ARS+R AR+HP
Sbjct: 404 GVMVAWTGLEHFRVGRYDPPPPATEPEDYVYDLRPRWPLGEEYAKGRSEARSMRTARIHP 463


>ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis]
           gi|223548868|gb|EEF50357.1| O-sialoglycoprotein
           endopeptidase, putative [Ricinus communis]
          Length = 455

 Score =  110 bits (276), Expect = 1e-22
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = -1

Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360
           GVMVAWTGIEHF  GRFDPPP ADEP+D ++DLRPRWPLGEEYAEGRS ARS++ AR+HP
Sbjct: 383 GVMVAWTGIEHFRIGRFDPPPPADEPEDIMYDLRPRWPLGEEYAEGRSKARSLKTARIHP 442


>ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326007|gb|EFH56427.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 468

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = -1

Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360
           GVMVAWTG+EHF  GR+DPPP A EPDD+V+DLRPRWPLGEEYA+GRS ARS+R AR+HP
Sbjct: 394 GVMVAWTGLEHFRVGRYDPPPPATEPDDFVYDLRPRWPLGEEYAKGRSKARSMRTARIHP 453


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