BLASTX nr result
ID: Coptis24_contig00025415
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025415 (539 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|2... 113 2e-23 ref|XP_002280713.1| PREDICTED: probable tRNA threonylcarbamoylad... 113 2e-23 ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380... 111 8e-23 ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative ... 110 1e-22 ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp.... 110 2e-22 >ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|222860825|gb|EEE98367.1| predicted protein [Populus trichocarpa] Length = 464 Score = 113 bits (283), Expect = 2e-23 Identities = 49/60 (81%), Positives = 55/60 (91%) Frame = -1 Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360 GVMVAWTGIEHF GRFDPPP ADE +DY++DLRPRWPLGEEYAEGRS+ARS+R AR+HP Sbjct: 392 GVMVAWTGIEHFCMGRFDPPPPADEHEDYMYDLRPRWPLGEEYAEGRSEARSLRTARIHP 451 >ref|XP_002280713.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1 [Vitis vinifera] gi|296089195|emb|CBI38898.3| unnamed protein product [Vitis vinifera] Length = 468 Score = 113 bits (282), Expect = 2e-23 Identities = 47/60 (78%), Positives = 56/60 (93%) Frame = -1 Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360 GVMVAWTG+EHF GR+DPPP A+EP+DYV+DLRPRWPLGEEY+EGRS+ARS+R AR+HP Sbjct: 395 GVMVAWTGLEHFRMGRYDPPPPANEPEDYVYDLRPRWPLGEEYSEGRSEARSLRTARIHP 454 >ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380780|gb|AAL36220.1| putative O-sialoglycoprotein endopeptidase [Arabidopsis thaliana] gi|18460924|gb|AAK00530.1| sialoglycoprotease GCP1 [Arabidopsis thaliana] gi|20196913|gb|AAB82636.2| putative O-sialoglycoprotein endopeptidase [Arabidopsis thaliana] gi|21436377|gb|AAM51358.1| putative O-sialoglycoprotein endopeptidase [Arabidopsis thaliana] gi|330255438|gb|AEC10532.1| glycoprotease 1 [Arabidopsis thaliana] Length = 480 Score = 111 bits (277), Expect = 8e-23 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = -1 Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360 GVMVAWTG+EHF GR+DPPP A EP+DYV+DLRPRWPLGEEYA+GRS+ARS+R AR+HP Sbjct: 404 GVMVAWTGLEHFRVGRYDPPPPATEPEDYVYDLRPRWPLGEEYAKGRSEARSMRTARIHP 463 >ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis] gi|223548868|gb|EEF50357.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis] Length = 455 Score = 110 bits (276), Expect = 1e-22 Identities = 48/60 (80%), Positives = 54/60 (90%) Frame = -1 Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360 GVMVAWTGIEHF GRFDPPP ADEP+D ++DLRPRWPLGEEYAEGRS ARS++ AR+HP Sbjct: 383 GVMVAWTGIEHFRIGRFDPPPPADEPEDIMYDLRPRWPLGEEYAEGRSKARSLKTARIHP 442 >ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326007|gb|EFH56427.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 468 Score = 110 bits (274), Expect = 2e-22 Identities = 47/60 (78%), Positives = 54/60 (90%) Frame = -1 Query: 539 GVMVAWTGIEHFSKGRFDPPPSADEPDDYVFDLRPRWPLGEEYAEGRSDARSIRKARMHP 360 GVMVAWTG+EHF GR+DPPP A EPDD+V+DLRPRWPLGEEYA+GRS ARS+R AR+HP Sbjct: 394 GVMVAWTGLEHFRVGRYDPPPPATEPDDFVYDLRPRWPLGEEYAKGRSKARSMRTARIHP 453