BLASTX nr result

ID: Coptis24_contig00025408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025408
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   128   4e-28
ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   119   2e-25
ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-l...   119   2e-25
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   119   3e-25

>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/82 (73%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   AFYRKKVMKAIMAMLRTTVPRCDDSAFRQTFKTLLSFEKEEKRKVIDYIDKISTIRKCSF 180
           AFYRKKV+KAI+AMLRTT+P CDD ++ Q FK LL FEKEEKR+VI+++DKIST+RKCSF
Sbjct: 552 AFYRKKVVKAIIAMLRTTLPGCDDGSYHQVFKALLPFEKEEKRRVIEHVDKISTVRKCSF 611

Query: 181 ISAARDIFAAKISGTFKRNQLS 246
           I+AA D+F+AKISGTFKR+QL+
Sbjct: 612 IAAACDVFSAKISGTFKRSQLT 633


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
           gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
           pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/82 (71%), Positives = 75/82 (91%)
 Frame = +1

Query: 1   AFYRKKVMKAIMAMLRTTVPRCDDSAFRQTFKTLLSFEKEEKRKVIDYIDKISTIRKCSF 180
           AFYRKKV+KAI+AMLRT +P+CDD  +RQ FK LL FEK+EK++V+D+++KI TIRKCSF
Sbjct: 585 AFYRKKVVKAIIAMLRTALPKCDDGPYRQAFKALLPFEKDEKKRVVDHVEKILTIRKCSF 644

Query: 181 ISAARDIFAAKISGTFKRNQLS 246
           ISAA+DIF+AKISGTFKR+QL+
Sbjct: 645 ISAAKDIFSAKISGTFKRSQLN 666


>ref|XP_004158147.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase
           PcrA-like [Cucumis sativus]
          Length = 1129

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/82 (64%), Positives = 71/82 (86%)
 Frame = +1

Query: 1   AFYRKKVMKAIMAMLRTTVPRCDDSAFRQTFKTLLSFEKEEKRKVIDYIDKISTIRKCSF 180
           AFYRKKV+K I+A+L+TT P CDD A+ Q FK L+ FEKE+K+++I++IDKIST+RKC F
Sbjct: 590 AFYRKKVVKTILALLKTTFPDCDDGAYHQAFKALMPFEKEDKKRIINHIDKISTVRKCRF 649

Query: 181 ISAARDIFAAKISGTFKRNQLS 246
           I AARD+F++KISGT KR+QL+
Sbjct: 650 IDAARDVFSSKISGTLKRSQLN 671


>ref|XP_004143728.1| PREDICTED: ATP-dependent DNA helicase PcrA-like [Cucumis sativus]
          Length = 1105

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/82 (64%), Positives = 71/82 (86%)
 Frame = +1

Query: 1   AFYRKKVMKAIMAMLRTTVPRCDDSAFRQTFKTLLSFEKEEKRKVIDYIDKISTIRKCSF 180
           AFYRKKV+K I+A+L+TT P CDD A+ Q FK L+ FEKE+K+++I++IDKIST+RKC F
Sbjct: 593 AFYRKKVVKTILALLKTTFPDCDDGAYHQAFKALMPFEKEDKKRIINHIDKISTVRKCRF 652

Query: 181 ISAARDIFAAKISGTFKRNQLS 246
           I AARD+F++KISGT KR+QL+
Sbjct: 653 IDAARDVFSSKISGTLKRSQLN 674


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/83 (63%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   AFYRKKVMKAIMAMLRTTVPRCDDSAFRQTFKTLLSFEKEEKRKVIDYIDKISTIRKCSF 180
           AFYRKKV++ IMAMLRT +P CDD ++ + FK L+  EK++K+++ID+I+KISTIR+CSF
Sbjct: 617 AFYRKKVVRTIMAMLRTALPGCDDGSYSRVFKALMPLEKDKKKRIIDHINKISTIRRCSF 676

Query: 181 ISAARDIFAAKISGTFKRNQLSH 249
           +SAA DIF+AKISGTFKR++L+H
Sbjct: 677 LSAASDIFSAKISGTFKRSELTH 699


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