BLASTX nr result

ID: Coptis24_contig00025403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025403
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595873.1| ABC transporter D family member [Medicago tr...    59   4e-07
gb|ABN08201.1| hypothetical protein MtrDRAFT_AC155884g15v2 [Medi...    59   4e-07
emb|CBI24120.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...    58   7e-07
emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]    58   7e-07

>ref|XP_003595873.1| ABC transporter D family member [Medicago truncatula]
           gi|355484921|gb|AES66124.1| ABC transporter D family
           member [Medicago truncatula]
          Length = 906

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/56 (55%), Positives = 32/56 (57%)
 Frame = -2

Query: 168 EVEKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFL 1
           EV+   PDL TL RRFWKVAAPYWSS D                  TGISVGFSFL
Sbjct: 154 EVQGENPDLQTLFRRFWKVAAPYWSSDDKVQARLQLAGVFALTLATTGISVGFSFL 209


>gb|ABN08201.1| hypothetical protein MtrDRAFT_AC155884g15v2 [Medicago truncatula]
          Length = 246

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/56 (55%), Positives = 32/56 (57%)
 Frame = -2

Query: 168 EVEKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFL 1
           EV+   PDL TL RRFWKVAAPYWSS D                  TGISVGFSFL
Sbjct: 154 EVQGENPDLQTLFRRFWKVAAPYWSSDDKVQARLQLAGVFALTLATTGISVGFSFL 209


>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/60 (48%), Positives = 35/60 (58%)
 Frame = -2

Query: 180 EENKEVEKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFL 1
           EE  +V+++ PD+ TL RRFWKVAAPYW S D                  TGISVGF+FL
Sbjct: 54  EEEDDVKRKAPDIPTLFRRFWKVAAPYWWSDDKVQARLQLAAVFALTLGTTGISVGFNFL 113


>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Vitis vinifera]
          Length = 722

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/60 (48%), Positives = 35/60 (58%)
 Frame = -2

Query: 180 EENKEVEKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFL 1
           EE  +V+++ PD+ TL RRFWKVAAPYW S D                  TGISVGF+FL
Sbjct: 54  EEEDDVKRKAPDIPTLFRRFWKVAAPYWWSDDKVQARLQLAAVFALTLGTTGISVGFNFL 113


>emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]
          Length = 1504

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/60 (48%), Positives = 35/60 (58%)
 Frame = -2

Query: 180 EENKEVEKRRPDLATLLRRFWKVAAPYWSSTDXXXXXXXXXXXXXXXXXXTGISVGFSFL 1
           EE  +V+++ PD+ TL RRFWKVAAPYW S D                  TGISVGF+FL
Sbjct: 785 EEEDDVKRKAPDIPTLFRRFWKVAAPYWWSDDKVQARLQLAAVFALTLGTTGISVGFNFL 844


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