BLASTX nr result

ID: Coptis24_contig00025401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025401
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30637.3| unnamed protein product [Vitis vinifera]               72   6e-11
emb|CAN84146.1| hypothetical protein VITISV_020434 [Vitis vinifera]    72   6e-11
gb|ADC94860.1| ERF3 transcription factor [Vitis pseudoreticulata]      71   8e-11
gb|AFG26327.1| ethylene response factor ERF2 [Eriobotrya japonica]     66   3e-09
ref|XP_002331947.1| AP2/ERF domain-containing transcription fact...    66   3e-09

>emb|CBI30637.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
 Frame = -1

Query: 174 ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQERNRT----GMKPAREIGKKHYRG 7
           ++ELPLNENDSQDMV+Y+VLNEA A+N  +S IP  +R  T     ++PAR I KKHYRG
Sbjct: 6   QSELPLNENDSQDMVIYQVLNEAFALN--NSIIPPIKRQTTPTSSALEPARTIAKKHYRG 63

Query: 6   VR 1
           VR
Sbjct: 64  VR 65


>emb|CAN84146.1| hypothetical protein VITISV_020434 [Vitis vinifera]
          Length = 153

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
 Frame = -1

Query: 174 ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQERNRT----GMKPAREIGKKHYRG 7
           ++ELPLNENDSQDMV+Y+VLNEA A+N  +S IP  +R  T     ++PAR I KKHYRG
Sbjct: 6   QSELPLNENDSQDMVIYQVLNEAFALN--NSIIPPIKRQTTPTSSALEPARTIAKKHYRG 63

Query: 6   VR 1
           VR
Sbjct: 64  VR 65


>gb|ADC94860.1| ERF3 transcription factor [Vitis pseudoreticulata]
          Length = 182

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
 Frame = -1

Query: 174 ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQERNRT----GMKPAREIGKKHYRG 7
           ++ELPLNENDSQDMVLYEVLNEA A+N   S IP  +   T     ++PAR I KKHYRG
Sbjct: 6   QSELPLNENDSQDMVLYEVLNEAFALNK--SIIPPIKHQTTPTSNALEPARTIAKKHYRG 63

Query: 6   VR 1
           VR
Sbjct: 64  VR 65


>gb|AFG26327.1| ethylene response factor ERF2 [Eriobotrya japonica]
          Length = 204

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
 Frame = -1

Query: 174 ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQ---ERNRTGMKPAREIGKKHYRGV 4
           +NELPLNENDSQDMV+Y+VL+EA ++  + S +P +    R    ++P + IGKKHYRGV
Sbjct: 22  QNELPLNENDSQDMVIYQVLHEATSL--TPSLLPQRHHIHRQPNRLEPTKNIGKKHYRGV 79

Query: 3   R 1
           R
Sbjct: 80  R 80


>ref|XP_002331947.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222874724|gb|EEF11855.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 183

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
 Frame = -1

Query: 171 NELPLNENDSQDMVLYEVLNEAMAINSSDSRI-PSQERNRTGM-KPARE-IGKKHYRGVR 1
           +ELP NENDSQDMV+Y+++NEA A NSS   I P  + N +GM +PAR  I KKHYRGVR
Sbjct: 8   HELPFNENDSQDMVIYQMINEASAPNSSTYNILPRSQINTSGMLQPARTVIAKKHYRGVR 67


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