BLASTX nr result

ID: Coptis24_contig00025378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025378
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71305.1| hypothetical protein VITISV_018193 [Vitis vinifera]    59   4e-07
emb|CAN72772.1| hypothetical protein VITISV_034213 [Vitis vinifera]    57   1e-06
emb|CAN61786.1| hypothetical protein VITISV_015874 [Vitis vinifera]    57   2e-06
emb|CAN68369.1| hypothetical protein VITISV_001581 [Vitis vinifera]    57   2e-06
emb|CAN66063.1| hypothetical protein VITISV_003345 [Vitis vinifera]    57   2e-06

>emb|CAN71305.1| hypothetical protein VITISV_018193 [Vitis vinifera]
          Length = 968

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
 Frame = -2

Query: 347 CERNWSTFGFVQLVKCCNSRTESLEDRVFVHYNLRLKNKHVQLKNQFEEEKKIMDLTSF- 171
           CERNWSTF  +   +        LE  VF +YN+RLK + ++ +N    EK  +DL    
Sbjct: 607 CERNWSTFALIHTKQRNXLAYSRLEQLVFCYYNMRLKLRDMEAENDRVAEKDYLDLLDIS 666

Query: 170 YPVNNDSDCPIFYWIDDRERTPKALLDECGRPNSYIAEQSGLPINKNLEPILN 12
             V  + D  +F W+      P  L DE G P+  IA  + L    N+E +L+
Sbjct: 667 AEVGEEEDNQLFQWV-----RPIHLDDEVGNPDPRIAAHA-LEFGVNVERVLS 713


>emb|CAN72772.1| hypothetical protein VITISV_034213 [Vitis vinifera]
          Length = 1017

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = -2

Query: 347 CERNWSTFGFVQLVKCCNSRTESLEDRVFVHYNLRLKNKHVQLKNQFEEEKKIMDLTSF- 171
           CERNWSTF  +   +        LE  VF +YN+RLK + ++ +N    EK  +DL    
Sbjct: 662 CERNWSTFALIHTKQXNRLAYSRLEQLVFCYYNMRLKLRDMEAENDRVXEKDYLDLLDIS 721

Query: 170 YPVNNDSDCPIFYWIDDRERTPKALLDECGRPNSYIAEQSGLPINKNLEPILN 12
             V  + D  +F W+      P  L DE G P+  IA  +      N+E +L+
Sbjct: 722 AEVGEEXDNQLFQWV-----RPIHLDDEVGNPDPRIAAHA-REFGVNVERVLS 768


>emb|CAN61786.1| hypothetical protein VITISV_015874 [Vitis vinifera]
          Length = 1003

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = -2

Query: 347 CERNWSTFGFVQLVKCCNSRTESLEDRVFVHYNLRLKNKHVQLKNQFEEEKKIMDLTSF- 171
           CERNWSTF  +   +        LE  VF +YN+RLK + ++ +N    EK  +DL    
Sbjct: 648 CERNWSTFALIHTKQRNRLAYSRLEQLVFCYYNMRLKLRDMEAENDRVAEKDYLDLLDIS 707

Query: 170 YPVNNDSDCPIFYWIDDRERTPKALLDECGRPNSYIAEQSGLPINKNLEPILN 12
             V  + D  +F W+      P  L DE G P+  IA  +      N+E +L+
Sbjct: 708 AEVGEEEDNQLFQWV-----RPIHLDDEVGNPDPRIAAHA-REFGVNVERVLS 754


>emb|CAN68369.1| hypothetical protein VITISV_001581 [Vitis vinifera]
          Length = 773

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = -2

Query: 347 CERNWSTFGFVQLVKCCNSRTESLEDRVFVHYNLRLKNKHVQLKNQFEEEKKIMDLTSF- 171
           CERNWSTF  +   +        LE  VF +YN+RLK + ++ +N    EK  +DL    
Sbjct: 555 CERNWSTFALIHTKQRNRLAYPRLEQLVFCYYNMRLKLRDMEAENDRVAEKDYLDLLDIS 614

Query: 170 YPVNNDSDCPIFYWIDDRERTPKALLDECGRPNSYIAEQSGLPINKNLEPILN 12
             V  + D  +F W+      P  L DE G P+  IA  +      N+E +L+
Sbjct: 615 AEVGEEEDNQLFQWV-----RPIHLDDEVGNPDPRIAAHA-REFGVNVERVLS 661


>emb|CAN66063.1| hypothetical protein VITISV_003345 [Vitis vinifera]
          Length = 814

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
 Frame = -2

Query: 347 CERNWSTFGFVQLVKCCNSRTESLEDRVFVHYNLRLKNKHVQLKNQFEEEKKIMDLTSF- 171
           CERNWSTF  +   +        LE  VF +YN+RLK + ++ +N    EK  +DL    
Sbjct: 596 CERNWSTFALIHTKQRNRLAYSRLEXLVFCYYNMRLKLRDMEAENDRVAEKDYLDLLDIS 655

Query: 170 YPVNNDSDCPIFYWIDDRERTPKALLDECGRPNSYIAEQSGLPINKNLEPILN 12
             V  + D  +F W+      P  L DE G P+  IA  +      N+E +L+
Sbjct: 656 AEVGEEEDNQLFQWV-----RPIHLDDEVGXPDPXIAAHA-REFGVNVERVLS 702


Top