BLASTX nr result

ID: Coptis24_contig00025366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025366
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275388.2| PREDICTED: TSL-kinase interacting protein 1-...    58   7e-07
emb|CAN64858.1| hypothetical protein VITISV_030493 [Vitis vinifera]    58   7e-07
ref|XP_002326366.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002275388.2| PREDICTED: TSL-kinase interacting protein 1-like [Vitis vinifera]
           gi|296082538|emb|CBI21543.3| unnamed protein product
           [Vitis vinifera]
          Length = 606

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -2

Query: 203 DSFDAAIAAHIYRHSQQPQHVTSGSHSSFLDAEETCHAFPSQKFTSSGKE-VSFESAASV 27
           DSFDA IA  + +  Q P+  +   HSS LDAEETCHAFP QKF+SSGK+ +    A S 
Sbjct: 459 DSFDAFIAGQM-QLPQGPRLPSHEVHSSILDAEETCHAFPCQKFSSSGKDFLVLGGANSG 517

Query: 26  SCIQE 12
           +C Q+
Sbjct: 518 ACSQD 522


>emb|CAN64858.1| hypothetical protein VITISV_030493 [Vitis vinifera]
          Length = 606

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/65 (52%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -2

Query: 203 DSFDAAIAAHIYRHSQQPQHVTSGSHSSFLDAEETCHAFPSQKFTSSGKE-VSFESAASV 27
           DSFDA IA  + +  Q P+  +   HSS LDAEETCHAFP QKF+SSGK+ +    A S 
Sbjct: 459 DSFDAFIAGQM-QLPQGPRLPSHEVHSSILDAEETCHAFPCQKFSSSGKDFLVLGGANSG 517

Query: 26  SCIQE 12
           +C Q+
Sbjct: 518 ACSQD 522


>ref|XP_002326366.1| predicted protein [Populus trichocarpa] gi|222833559|gb|EEE72036.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
 Frame = -2

Query: 206 CDSFDAAIAAHIYRHSQQPQHVTS-GSH-SSFLDAEETCHAFPSQKFTSSGKEVSFESAA 33
           CDSFDAAIAAHI RH  +   V+S  SH SS  D EETC AF  Q+  S  KEV+  + A
Sbjct: 585 CDSFDAAIAAHISRHQSKVGFVSSVTSHTSSIWDGEETCDAFAFQRNHSLRKEVTTSAVA 644

Query: 32  S 30
           S
Sbjct: 645 S 645


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