BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025328
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japo...   124   6e-27
gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonic...   124   6e-27

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/82 (74%), Positives = 69/82 (84%)
 Frame = +1

Query: 1   STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180
           STWNS++G LA HGH ++SI LF EM++ K RPDEITFVGVLVACSH G V EG QYFDL
Sbjct: 309 STWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDL 368

Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246
           MR +Y IEPNI+HYGCMVDLLG
Sbjct: 369 MRDEYNIEPNIRHYGCMVDLLG 390


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/82 (74%), Positives = 69/82 (84%)
 Frame = +1

Query: 1   STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180
           STWNS++G LA HGH ++SI LF EM++ K RPDEITFVGVLVACSH G V EG QYFDL
Sbjct: 344 STWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDL 403

Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246
           MR +Y IEPNI+HYGCMVDLLG
Sbjct: 404 MRDEYNIEPNIRHYGCMVDLLG 425


>ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Brachypodium distachyon]
          Length = 532

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/82 (71%), Positives = 70/82 (85%)
 Frame = +1

Query: 1   STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180
           STWNSIIG LA+HGHV ESI +F +M +EK RPDEITFV VL+ACSHGGMV +G +YF+L
Sbjct: 344 STWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNL 403

Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246
           M+  Y IEPN+KHYGCMVD+LG
Sbjct: 404 MQHHYRIEPNVKHYGCMVDMLG 425


>gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
          Length = 523

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/82 (68%), Positives = 70/82 (85%)
 Frame = +1

Query: 1   STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180
           STWNSI+G LA+HGHV ESI +F +M + K RPDEITFV VL+ACSHGGMV +G ++F+L
Sbjct: 314 STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNL 373

Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246
           M+ +Y +EPNIKHYGCMVD+LG
Sbjct: 374 MQHKYRVEPNIKHYGCMVDMLG 395


>gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 823

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/82 (68%), Positives = 70/82 (85%)
 Frame = +1

Query: 1   STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180
           STWNSI+G LA+HGHV ESI +F +M + K RPDEITFV VL+ACSHGGMV +G ++F+L
Sbjct: 314 STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNL 373

Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246
           M+ +Y +EPNIKHYGCMVD+LG
Sbjct: 374 MQHKYRVEPNIKHYGCMVDMLG 395