BLASTX nr result
ID: Coptis24_contig00025328
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025328 (247 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22243.3| unnamed protein product [Vitis vinifera] 133 1e-29 ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi... 133 1e-29 ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containi... 128 4e-28 gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japo... 124 6e-27 gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonic... 124 6e-27 >emb|CBI22243.3| unnamed protein product [Vitis vinifera] Length = 526 Score = 133 bits (335), Expect = 1e-29 Identities = 61/82 (74%), Positives = 69/82 (84%) Frame = +1 Query: 1 STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180 STWNS++G LA HGH ++SI LF EM++ K RPDEITFVGVLVACSH G V EG QYFDL Sbjct: 309 STWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDL 368 Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246 MR +Y IEPNI+HYGCMVDLLG Sbjct: 369 MRDEYNIEPNIRHYGCMVDLLG 390 >ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Vitis vinifera] Length = 550 Score = 133 bits (335), Expect = 1e-29 Identities = 61/82 (74%), Positives = 69/82 (84%) Frame = +1 Query: 1 STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180 STWNS++G LA HGH ++SI LF EM++ K RPDEITFVGVLVACSH G V EG QYFDL Sbjct: 344 STWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDL 403 Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246 MR +Y IEPNI+HYGCMVDLLG Sbjct: 404 MRDEYNIEPNIRHYGCMVDLLG 425 >ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like [Brachypodium distachyon] Length = 532 Score = 128 bits (322), Expect = 4e-28 Identities = 59/82 (71%), Positives = 70/82 (85%) Frame = +1 Query: 1 STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180 STWNSIIG LA+HGHV ESI +F +M +EK RPDEITFV VL+ACSHGGMV +G +YF+L Sbjct: 344 STWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNL 403 Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246 M+ Y IEPN+KHYGCMVD+LG Sbjct: 404 MQHHYRIEPNVKHYGCMVDMLG 425 >gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group] Length = 523 Score = 124 bits (312), Expect = 6e-27 Identities = 56/82 (68%), Positives = 70/82 (85%) Frame = +1 Query: 1 STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180 STWNSI+G LA+HGHV ESI +F +M + K RPDEITFV VL+ACSHGGMV +G ++F+L Sbjct: 314 STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNL 373 Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246 M+ +Y +EPNIKHYGCMVD+LG Sbjct: 374 MQHKYRVEPNIKHYGCMVDMLG 395 >gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group] Length = 823 Score = 124 bits (312), Expect = 6e-27 Identities = 56/82 (68%), Positives = 70/82 (85%) Frame = +1 Query: 1 STWNSIIGALAVHGHVDESIQLFIEMQREKFRPDEITFVGVLVACSHGGMVIEGCQYFDL 180 STWNSI+G LA+HGHV ESI +F +M + K RPDEITFV VL+ACSHGGMV +G ++F+L Sbjct: 314 STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNL 373 Query: 181 MRIQYGIEPNIKHYGCMVDLLG 246 M+ +Y +EPNIKHYGCMVD+LG Sbjct: 374 MQHKYRVEPNIKHYGCMVDMLG 395