BLASTX nr result

ID: Coptis24_contig00025326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025326
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]    57   2e-06
ref|XP_002279964.1| PREDICTED: uncharacterized protein LOC100255...    56   3e-06

>emb|CAN63610.1| hypothetical protein VITISV_000282 [Vitis vinifera]
          Length = 1138

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +1

Query: 1    HILKPNPHTDQDNSKLLHSTIPFGSMITSAKVSNLQKKTSKIYRF 135
            HILKP+ + D D+S+  HSTIPF ++  S +VS  QKKT+KIYRF
Sbjct: 1094 HILKPSQNMDHDSSRPTHSTIPFAAVTDSGRVSGPQKKTAKIYRF 1138


>ref|XP_002279964.1| PREDICTED: uncharacterized protein LOC100255858 [Vitis vinifera]
          Length = 1000

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +1

Query: 1    HILKPNPHTDQDNSKLLHSTIPFGSMITSAKVSNLQKKTSKIYRF 135
            HILKP+ + D D+S+  HSTIPF ++  S +VS  QKKT+KIYRF
Sbjct: 956  HILKPSQNMDHDSSRPTHSTIPFAAVTDSDRVSGPQKKTAKIYRF 1000


Top