BLASTX nr result

ID: Coptis24_contig00025324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025324
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855...   166   3e-39
emb|CBI38268.3| unnamed protein product [Vitis vinifera]              166   3e-39
ref|XP_002302344.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002514042.1| conserved hypothetical protein [Ricinus comm...   142   3e-32
emb|CBI19266.3| unnamed protein product [Vitis vinifera]              141   7e-32

>ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855017 [Vitis vinifera]
          Length = 425

 Score =  166 bits (420), Expect = 3e-39
 Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 19/172 (11%)
 Frame = +3

Query: 138 IAVACSLQLSHELGICNNHKHT-------------------TSKLKRLDALSFHLLNRVY 260
           +AV+ SL  SHELGIC NH H+                   +S   R D+ SFHL + +Y
Sbjct: 1   MAVSGSLHFSHELGICKNHGHSKQLKSLMGKGKSHLLSVTLSSHASRQDSWSFHLSDSIY 60

Query: 261 QPIWSSPSRLNVFICRSSVIPIRVNEIPILKTAATAVARAYNGFPGNSFVLRLVPGLVII 440
           +PI    +R NVF C S ++P + +EIP++K A+TA+ R+ N    +  VL+LVP + II
Sbjct: 61  RPINLIHNRYNVFKCNSFLVPSKAHEIPVIKIASTALMRSCNALQDSPLVLKLVPAVGII 120

Query: 441 VFAIWGLVPLVSYGRNLFLKRSDNSWKRSGAHYVTTSYLQPLLLWTGATLVC 596
           VFA+WGL PL+   RNLF ++SDNSW++S  HYV TSYLQPLLLWTGATL+C
Sbjct: 121 VFAVWGLGPLMRQTRNLFPQKSDNSWRKSSTHYVMTSYLQPLLLWTGATLIC 172


>emb|CBI38268.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  166 bits (420), Expect = 3e-39
 Identities = 84/172 (48%), Positives = 112/172 (65%), Gaps = 19/172 (11%)
 Frame = +3

Query: 138 IAVACSLQLSHELGICNNHKHT-------------------TSKLKRLDALSFHLLNRVY 260
           +AV+ SL  SHELGIC NH H+                   +S   R D+ SFHL + +Y
Sbjct: 1   MAVSGSLHFSHELGICKNHGHSKQLKSLMGKGKSHLLSVTLSSHASRQDSWSFHLSDSIY 60

Query: 261 QPIWSSPSRLNVFICRSSVIPIRVNEIPILKTAATAVARAYNGFPGNSFVLRLVPGLVII 440
           +PI    +R NVF C S ++P + +EIP++K A+TA+ R+ N    +  VL+LVP + II
Sbjct: 61  RPINLIHNRYNVFKCNSFLVPSKAHEIPVIKIASTALMRSCNALQDSPLVLKLVPAVGII 120

Query: 441 VFAIWGLVPLVSYGRNLFLKRSDNSWKRSGAHYVTTSYLQPLLLWTGATLVC 596
           VFA+WGL PL+   RNLF ++SDNSW++S  HYV TSYLQPLLLWTGATL+C
Sbjct: 121 VFAVWGLGPLMRQTRNLFPQKSDNSWRKSSTHYVMTSYLQPLLLWTGATLIC 172


>ref|XP_002302344.1| predicted protein [Populus trichocarpa] gi|222844070|gb|EEE81617.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  150 bits (379), Expect = 2e-34
 Identities = 72/126 (57%), Positives = 88/126 (69%)
 Frame = +3

Query: 219 RLDALSFHLLNRVYQPIWSSPSRLNVFICRSSVIPIRVNEIPILKTAATAVARAYNGFPG 398
           RLD    H LN    P    PSR NVF+CRS + P   NEIP+LK+AA A  R+Y+   G
Sbjct: 1   RLDPWGLHFLNSTRGPPSPVPSRCNVFLCRSVLTPGGGNEIPVLKSAALAFTRSYDALRG 60

Query: 399 NSFVLRLVPGLVIIVFAIWGLVPLVSYGRNLFLKRSDNSWKRSGAHYVTTSYLQPLLLWT 578
           ++ VL+L+P + II FA WGL PL+  GR +FL +SDNSWK+S  HYV TSYLQPLLLWT
Sbjct: 61  SNLVLKLIPAIGIITFAAWGLGPLIWLGRTIFLHKSDNSWKKSSTHYVVTSYLQPLLLWT 120

Query: 579 GATLVC 596
           GATL+C
Sbjct: 121 GATLIC 126


>ref|XP_002514042.1| conserved hypothetical protein [Ricinus communis]
           gi|223547128|gb|EEF48625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  142 bits (359), Expect = 3e-32
 Identities = 77/169 (45%), Positives = 103/169 (60%), Gaps = 21/169 (12%)
 Frame = +3

Query: 153 SLQLSHELGI-----CNNHKHT----------------TSKLKRLDALSFHLLNRVYQPI 269
           S+QLS EL I     C + ++T                +S   R DA + H L+ ++QPI
Sbjct: 6   SIQLSQELKIYTSRGCGSQQNTVLGKGKSRLFLANVTLSSHGLRQDAWTLHFLSSMHQPI 65

Query: 270 WSSPSRLNVFICRSSVIPIRVNEIPILKTAATAVARAYNGFPGNSFVLRLVPGLVIIVFA 449
             +PSR NV +C+S +      EIP++K+AA  + R+YN   G+  VL+L+P + II FA
Sbjct: 66  RPAPSRCNVLVCQSLLTSQGGTEIPLVKSAAVVLTRSYNALSGSPLVLKLIPAISIIAFA 125

Query: 450 IWGLVPLVSYGRNLFLKRSDNSWKRSGAHYVTTSYLQPLLLWTGATLVC 596
            WGL PL+  GR +FL  SDN+WK+S  HYV TSYLQPLLLWTGA LVC
Sbjct: 126 SWGLGPLLRLGRIIFLHGSDNNWKKSSTHYVLTSYLQPLLLWTGAILVC 174


>emb|CBI19266.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  141 bits (356), Expect = 7e-32
 Identities = 78/172 (45%), Positives = 101/172 (58%), Gaps = 19/172 (11%)
 Frame = +3

Query: 138 IAVACSLQLSHELGICNNHKHT-------------------TSKLKRLDALSFHLLNRVY 260
           +A+A S+QLS ELGI N H ++                   +S   R DALS HLLN + 
Sbjct: 1   MALAGSMQLSRELGIQNRHGYSNQPKIMMAKDRLHLLSITLSSHASRQDALSLHLLNSMR 60

Query: 261 QPIWSSPSRLNVFICRSSVIPIRVNEIPILKTAATAVARAYNGFPGNSFVLRLVPGLVII 440
             I    SR   F+CRS + P   NEI +LK+AA  + R+ N   G   VL+LVP + I+
Sbjct: 61  GSITPVSSRCEFFLCRSFLAPGGGNEISVLKSAALVLTRSCNALRGRPLVLQLVPAVSIV 120

Query: 441 VFAIWGLVPLVSYGRNLFLKRSDNSWKRSGAHYVTTSYLQPLLLWTGATLVC 596
            FA WGL PL+   RNLFL ++D+SWK+S  +YV T YLQPLLLW GA L+C
Sbjct: 121 AFAAWGLGPLMRLSRNLFLNKTDSSWKKSSTYYVLTYYLQPLLLWIGAMLIC 172


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