BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025320
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-21
ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   105   4e-21
ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
emb|CBI14948.3| unnamed protein product [Vitis vinifera]              105   4e-21

>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  108 bits (269), Expect = 6e-22
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = -1

Query: 305 LIATDKGTTLRVVKNLRVCVDCHAAIKLISKIFNREIVVRDRNRFHHFKEGSCSCKDYW 129
           LI+T  GTT+R++KNLRVC +CH+A KLISKIFNREI+ RDRNRFHHFK+GSCSCKDYW
Sbjct: 678 LISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/59 (77%), Positives = 53/59 (89%)
 Frame = -1

Query: 305 LIATDKGTTLRVVKNLRVCVDCHAAIKLISKIFNREIVVRDRNRFHHFKEGSCSCKDYW 129
           LI+T   TT+R+VKNLRVC +CH+AIKLISKIFNREI+ RDRNRFHHFK+GSCSC DYW
Sbjct: 680 LISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738


>ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  105 bits (262), Expect = 4e-21
 Identities = 44/59 (74%), Positives = 52/59 (88%)
 Frame = -1

Query: 305 LIATDKGTTLRVVKNLRVCVDCHAAIKLISKIFNREIVVRDRNRFHHFKEGSCSCKDYW 129
           L+ T  GT +R++KNLRVC DCH AIKLISK+F REI+VRDR+RFHHFK+GSCSCKDYW
Sbjct: 551 LVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609


>ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  105 bits (262), Expect = 4e-21
 Identities = 44/59 (74%), Positives = 52/59 (88%)
 Frame = -1

Query: 305 LIATDKGTTLRVVKNLRVCVDCHAAIKLISKIFNREIVVRDRNRFHHFKEGSCSCKDYW 129
           L+ T  GT +R++KNLRVC DCH AIKLISK+F REI+VRDR+RFHHFK+GSCSCKDYW
Sbjct: 551 LVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609


>emb|CBI14948.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = -1

Query: 305 LIATDKGTTLRVVKNLRVCVDCHAAIKLISKIFNREIVVRDRNRFHHFKEGSCSCKDYW 129
           LI +  GTT+R+ KNLRVC DCH A KL+SK+FNREIVVRDR RFHHFKEGSCSC DYW
Sbjct: 343 LIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 401