BLASTX nr result

ID: Coptis24_contig00025319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025319
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91272.1| transposon protein, putative, CACTA, En/Spm sub-c...   122   3e-30
emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]   126   7e-30
emb|CAN75975.1| hypothetical protein VITISV_028849 [Vitis vinifera]   132   2e-29
emb|CAN71609.1| hypothetical protein VITISV_013246 [Vitis vinifera]   132   2e-29
emb|CAN74938.1| hypothetical protein VITISV_007244 [Vitis vinifera]   132   3e-29

>gb|ABA91272.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 823

 Score =  122 bits (306), Expect(2) = 3e-30
 Identities = 52/84 (61%), Positives = 67/84 (79%)
 Frame = +3

Query: 90  LCLASDGFNPFRDMSNTYNMWPVMLILYNMPPWKCMKESFIFMSLLIPGRTTPGNEIDVY 269
           LCLASDGF PF +M  +Y++WPV L+  N+PPW CMK+  + +S+L+PG   PG+ IDVY
Sbjct: 260 LCLASDGFQPFANMRTSYSIWPVFLVPLNLPPWMCMKQQNVMLSMLLPGPDGPGDAIDVY 319

Query: 270 LQPLIEELIDLWENGVETYDVMTK 341
           LQPLIEELI+LWE+GV+TYD  TK
Sbjct: 320 LQPLIEELIELWEDGVDTYDSSTK 343



 Score = 34.7 bits (78), Expect(2) = 3e-30
 Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
 Frame = +2

Query: 2   DNVLKHPANSKV*E--DKEHQAFASDPRN 82
           D V++HPA+SK  +  DK H +FAS+PRN
Sbjct: 229 DGVMRHPADSKAWKEFDKIHSSFASEPRN 257


>emb|CAN64494.1| hypothetical protein VITISV_018031 [Vitis vinifera]
          Length = 1295

 Score =  126 bits (316), Expect(2) = 7e-30
 Identities = 54/81 (66%), Positives = 67/81 (82%)
 Frame = +3

Query: 90  LCLASDGFNPFRDMSNTYNMWPVMLILYNMPPWKCMKESFIFMSLLIPGRTTPGNEIDVY 269
           L LA+DGFNPF  MSN Y+MWPV+L+ YNMPPWKCMKESF  MSLLIPG   PG +ID+Y
Sbjct: 319 LGLATDGFNPFGTMSNNYSMWPVVLVPYNMPPWKCMKESFFMMSLLIPGPHAPGKDIDIY 378

Query: 270 LQPLIEELIDLWENGVETYDV 332
           L+PL++EL +LW +GV T+D+
Sbjct: 379 LRPLVDELKELWHDGVHTFDM 399



 Score = 29.3 bits (64), Expect(2) = 7e-30
 Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +2

Query: 2   DNVLKHPANSKV*EDKEHQA--FASDPRN 82
           D VL+HPA+S+V +D ++Q   FA D RN
Sbjct: 288 DGVLRHPADSEVWKDFDNQYPWFAQDARN 316


>emb|CAN75975.1| hypothetical protein VITISV_028849 [Vitis vinifera]
          Length = 283

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/87 (67%), Positives = 73/87 (83%)
 Frame = +3

Query: 90  LCLASDGFNPFRDMSNTYNMWPVMLILYNMPPWKCMKESFIFMSLLIPGRTTPGNEIDVY 269
           L LA+DGFNPF +MS +Y+MWPV+LI YN+PPW CMK++F  +SLLIPG T PGN+ID+Y
Sbjct: 182 LGLANDGFNPFGNMSISYSMWPVVLIPYNLPPWMCMKQTFFMLSLLIPGPTAPGNDIDIY 241

Query: 270 LQPLIEELIDLWENGVETYDVMTK*MF 350
           LQPLI+EL DLW+ GVETYD  TK +F
Sbjct: 242 LQPLIDELNDLWDVGVETYDASTKQIF 268


>emb|CAN71609.1| hypothetical protein VITISV_013246 [Vitis vinifera]
          Length = 1277

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/84 (70%), Positives = 71/84 (84%)
 Frame = +3

Query: 90  LCLASDGFNPFRDMSNTYNMWPVMLILYNMPPWKCMKESFIFMSLLIPGRTTPGNEIDVY 269
           L LASDGFNPF +MS +Y+MWPV+LI YN+PPW CMK++F  +SLLIPG T PGN+ID+Y
Sbjct: 233 LGLASDGFNPFGNMSISYSMWPVVLIPYNLPPWMCMKQTFFMLSLLIPGPTAPGNDIDIY 292

Query: 270 LQPLIEELIDLWENGVETYDVMTK 341
           LQPLI+EL DLW+ GVETYD  TK
Sbjct: 293 LQPLIDELNDLWDVGVETYDASTK 316


>emb|CAN74938.1| hypothetical protein VITISV_007244 [Vitis vinifera]
          Length = 618

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/84 (69%), Positives = 71/84 (84%)
 Frame = +3

Query: 90  LCLASDGFNPFRDMSNTYNMWPVMLILYNMPPWKCMKESFIFMSLLIPGRTTPGNEIDVY 269
           L LASDGFNPF ++S +YNMWPV+LI YN+PPW CMK++F  +SLLIPG T PGN+ID+Y
Sbjct: 220 LGLASDGFNPFGNLSISYNMWPVVLIPYNLPPWMCMKQTFFMLSLLIPGPTAPGNDIDIY 279

Query: 270 LQPLIEELIDLWENGVETYDVMTK 341
           LQPLI+EL DLW+ GV+TYD  TK
Sbjct: 280 LQPLIDELNDLWDVGVQTYDASTK 303


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