BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025309
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27495.3| unnamed protein product [Vitis vinifera]              207   2e-51
emb|CBI24106.3| unnamed protein product [Vitis vinifera]              205   8e-51
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...   194   2e-47
ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|2...   183   4e-44

>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  207 bits (528), Expect = 2e-51
 Identities = 103/179 (57%), Positives = 137/179 (76%)
 Frame = +1

Query: 250 DNLNDFICGLSKDRRTEALAFEYYQKAKAQPEFVPNKLTIKLLVRLITSCLKARKFSTTE 429
           +NLNDF+CGL +D R+E LAF+YYQK K +PEF P+K T++ ++RLI+SC++ARKF  TE
Sbjct: 51  ENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDKETLERIIRLISSCIRARKFRITE 110

Query: 430 VLLGSFESEDGLAVFAFESAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYCQIMEAYG 609
            LL  F   D +A+  F SAM GYNKLHM+SSTI V++RMK AGV+ ++  Y +IMEAY 
Sbjct: 111 SLLEVFSYNDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYI 170

Query: 610 KIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSRRGFEALELFRELTGKGIV 786
           KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR++T KGI+
Sbjct: 171 KIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGIL 229


>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  205 bits (522), Expect = 8e-51
 Identities = 109/214 (50%), Positives = 148/214 (69%), Gaps = 3/214 (1%)
 Frame = +1

Query: 154 LPSLLEQGATKE---LQTTEIDKSFADAQQNVVSKDNLNDFICGLSKDRRTEALAFEYYQ 324
           LP ++   +T +   L   E+D    D        +NLNDF+CGL +D R+E LAF+YYQ
Sbjct: 5   LPRVISLESTHDHHHLPVIELDVELPDLTPK---DENLNDFLCGLFRDPRSEELAFDYYQ 61

Query: 325 KAKAQPEFVPNKLTIKLLVRLITSCLKARKFSTTEVLLGSFESEDGLAVFAFESAMKGYN 504
           K K +PEF P+K T++ ++RLI+SC++ARKF  TE LL  F   D +A+    SAM GYN
Sbjct: 62  KVKERPEFRPDKETLERIIRLISSCIRARKFRITESLLEVFSYNDDVALLVCNSAMGGYN 121

Query: 505 KLHMYSSTIMVFNRMKRAGVLLDAGCYCQIMEAYGKIGDTDKVLSLFKEFASKDLQLSST 684
           KLHM+SSTI V++RMK AGV+ ++  Y +IMEAY KI D +KV++LF+EF S+ +  S  
Sbjct: 122 KLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPF 181

Query: 685 STQIFSILCDSLGKSRRGFEALELFRELTGKGIV 786
           STQI+ ILC+SLGK  R FEALE FR++T KGI+
Sbjct: 182 STQIYRILCESLGKMGRAFEALEFFRDMTKKGIL 215


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score =  198 bits (503), Expect = 1e-48
 Identities = 120/287 (41%), Positives = 165/287 (57%), Gaps = 35/287 (12%)
 Frame = +1

Query: 31  SISPCKEI--LPKSSNGSSKILSFPSVSRSNFGSFYVNVAGSQLPSLLEQGA-TKELQTT 201
           S S C++   L  +   + K+L   S+  SN    +VN +    P + E+      L   
Sbjct: 8   STSNCRQPHKLKLTFTSTCKLLPIFSLPCSNSRYLFVNNSSYSSPIVAEESTHDHHLPVI 67

Query: 202 EIDKSFADAQQNVVSKDNLNDFICGLSKDRRTEALAFEYYQKAKAQPEFVPNKLTIKLLV 381
           E+D    D        +NLNDF+CGL +D R+E LAF+YYQK K +PEF P+K T++ ++
Sbjct: 68  ELDVELPDLTPK---DENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDKETLERII 124

Query: 382 R--------------------------------LITSCLKARKFSTTEVLLGSFESEDGL 465
           R                                LI+SC++ARKF  TE LL  F   D +
Sbjct: 125 RYLIRSKKWGLSLLVFEDFKSFDAQLDGDICCRLISSCIRARKFRITESLLEVFSYNDDV 184

Query: 466 AVFAFESAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYCQIMEAYGKIGDTDKVLSLF 645
           A+  F SAM GYNKLHM+SSTI V++RMK AGV+ ++  Y +IMEAY KI D +KV++LF
Sbjct: 185 ALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTLF 244

Query: 646 KEFASKDLQLSSTSTQIFSILCDSLGKSRRGFEALELFRELTGKGIV 786
           +EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR++T KGI+
Sbjct: 245 QEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGIL 291


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score =  194 bits (493), Expect = 2e-47
 Identities = 119/288 (41%), Positives = 164/288 (56%), Gaps = 36/288 (12%)
 Frame = +1

Query: 31  SISPCKEI--LPKSSNGSSKILSFPSVSRSNFGSFYVNVAGSQLPSLLEQGATKE--LQT 198
           S S C++   L  +   + K+L   S+  SN    +VN +    P + E+       L  
Sbjct: 8   STSNCRQPHRLKLTFTSTCKLLPIFSLPCSNSRYLFVNNSSYSSPIVAEESTHDHHHLPV 67

Query: 199 TEIDKSFADAQQNVVSKDNLNDFICGLSKDRRTEALAFEYYQKAKAQPEFVPNKLTIKLL 378
            E+D    D        +NLNDF+CGL +D R+E LAF+YYQK K +PEF P+K T++ +
Sbjct: 68  IELDVELPDLTPK---DENLNDFLCGLFRDPRSEELAFDYYQKVKERPEFRPDKETLERI 124

Query: 379 VR--------------------------------LITSCLKARKFSTTEVLLGSFESEDG 462
           +R                                LI+SC++ARKF  TE LL  F   D 
Sbjct: 125 IRYLIRSKKWGLSLLVFEDFKSFDVQLDGDICCRLISSCIRARKFRITESLLEVFSYNDD 184

Query: 463 LAVFAFESAMKGYNKLHMYSSTIMVFNRMKRAGVLLDAGCYCQIMEAYGKIGDTDKVLSL 642
           +A+    SAM GYNKLHM+SSTI V++RMK AGV+ ++  Y +IMEAY KI D +KV++L
Sbjct: 185 VALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKVVTL 244

Query: 643 FKEFASKDLQLSSTSTQIFSILCDSLGKSRRGFEALELFRELTGKGIV 786
           F+EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR++T KGI+
Sbjct: 245 FQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGIL 292


>ref|XP_002314741.1| predicted protein [Populus trichocarpa] gi|222863781|gb|EEF00912.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  183 bits (464), Expect = 4e-44
 Identities = 98/212 (46%), Positives = 134/212 (63%), Gaps = 33/212 (15%)
 Frame = +1

Query: 250 DNLNDFICGLSKDRRTEALAFEYYQKAKAQPEFVPNKLTIKLLVR--------------- 384
           D LNDF+CG+ +D ++E LA+EYY+KAK +PEF P +  +KLL+R               
Sbjct: 2   DKLNDFLCGVLQDPKSEELAYEYYKKAKEKPEFRPQRPVLKLLIRYLIQSDKWGLVLSLA 61

Query: 385 -----------------LITSCLKARKFSTTEVLLGSFESEDGLAVFAFESAMKGYNKLH 513
                            L++SC++AR+F   E LL +F+S+  +AV AF+SAMKGYNKLH
Sbjct: 62  DDFKKYNVFPDSFTFSTLVSSCIRARRFKIVENLLENFKSDSKIAVLAFDSAMKGYNKLH 121

Query: 514 MYSSTIMVFNRMKRAGVLLDAGCYCQIMEAYGKIGDTDKVLSLFKEFASKDLQLS-STST 690
           MY STI V  +M  AG+ LD+ CYCQIM+AY K+GD +KV++LF EF S+ L        
Sbjct: 122 MYGSTISVHEKMILAGIPLDSRCYCQIMKAYYKLGDAEKVVALFNEFESRKLDSKPMILR 181

Query: 691 QIFSILCDSLGKSRRGFEALELFRELTGKGIV 786
           QIF ILC SLG+S + F+ALE  R++  KGI+
Sbjct: 182 QIFKILCLSLGRSGQAFQALEYSRDMRKKGIL 213