BLASTX nr result
ID: Coptis24_contig00025302
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025302 (746 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin... 199 7e-49 emb|CBI35338.3| unnamed protein product [Vitis vinifera] 199 7e-49 ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|2... 191 1e-46 ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2... 182 6e-44 ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu... 182 8e-44 >ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1-like [Vitis vinifera] Length = 800 Score = 199 bits (505), Expect = 7e-49 Identities = 104/145 (71%), Positives = 118/145 (81%) Frame = +2 Query: 2 VLRRYLGRNDIKGAINAMEKMADHAVSADLISILNEKTDIITLDICTCXXXXXXXXXDSK 181 V+ R+ RNDIKGAI AMEKMADH+V AD+ISIL EK D++TL+ICT +S+ Sbjct: 656 VVHRFWERNDIKGAIGAMEKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESE 715 Query: 182 MDRQLGISLEMLLKLVKIFGSVIHSTLSASTSVGVDIQAEQRHERCNQCFIELTKVKHYL 361 MDR LGISLEMLLKLV+IFGSVIHSTLSAS+SVGVDIQAEQR ERCN CFIEL K+KH L Sbjct: 716 MDRHLGISLEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCL 775 Query: 362 PSLTRWGGSVAKSAHELNLVLQEVI 436 P+LTR GGSVAK A ELNL L EV+ Sbjct: 776 PALTRRGGSVAKLAQELNLALLEVL 800 >emb|CBI35338.3| unnamed protein product [Vitis vinifera] Length = 989 Score = 199 bits (505), Expect = 7e-49 Identities = 104/145 (71%), Positives = 118/145 (81%) Frame = +2 Query: 2 VLRRYLGRNDIKGAINAMEKMADHAVSADLISILNEKTDIITLDICTCXXXXXXXXXDSK 181 V+ R+ RNDIKGAI AMEKMADH+V AD+ISIL EK D++TL+ICT +S+ Sbjct: 845 VVHRFWERNDIKGAIGAMEKMADHSVFADVISILREKPDVVTLEICTSLLPLLTSLLESE 904 Query: 182 MDRQLGISLEMLLKLVKIFGSVIHSTLSASTSVGVDIQAEQRHERCNQCFIELTKVKHYL 361 MDR LGISLEMLLKLV+IFGSVIHSTLSAS+SVGVDIQAEQR ERCN CFIEL K+KH L Sbjct: 905 MDRHLGISLEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKHCL 964 Query: 362 PSLTRWGGSVAKSAHELNLVLQEVI 436 P+LTR GGSVAK A ELNL L EV+ Sbjct: 965 PALTRRGGSVAKLAQELNLALLEVL 989 >ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|222851705|gb|EEE89252.1| predicted protein [Populus trichocarpa] Length = 802 Score = 191 bits (485), Expect = 1e-46 Identities = 100/144 (69%), Positives = 116/144 (80%) Frame = +2 Query: 2 VLRRYLGRNDIKGAINAMEKMADHAVSADLISILNEKTDIITLDICTCXXXXXXXXXDSK 181 V+ RY RND+KGAI AMEKMADHAV +D+ISI+ +K DI+TLDICTC +S Sbjct: 658 VVYRYWERNDVKGAIGAMEKMADHAVLSDVISIVADKIDIVTLDICTCLLPLLTNMLESD 717 Query: 182 MDRQLGISLEMLLKLVKIFGSVIHSTLSASTSVGVDIQAEQRHERCNQCFIELTKVKHYL 361 MDR L ISL+MLLKLV++FGS+I+STLSASTSVGVDI+AEQR ERCN CF+EL KVK L Sbjct: 718 MDRHLSISLDMLLKLVRMFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCL 777 Query: 362 PSLTRWGGSVAKSAHELNLVLQEV 433 +LTR GGSVAK AHELNL LQEV Sbjct: 778 LTLTRKGGSVAKFAHELNLALQEV 801 >ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1| predicted protein [Populus trichocarpa] Length = 728 Score = 182 bits (462), Expect = 6e-44 Identities = 97/144 (67%), Positives = 111/144 (77%) Frame = +2 Query: 2 VLRRYLGRNDIKGAINAMEKMADHAVSADLISILNEKTDIITLDICTCXXXXXXXXXDSK 181 V+ RY RND+KGAI AM KMADHAV AD+ISI+ +K D +TLDICTC +S Sbjct: 584 VVHRYWERNDVKGAIGAMGKMADHAVLADVISIVADKIDTVTLDICTCLLPLLTNLLESD 643 Query: 182 MDRQLGISLEMLLKLVKIFGSVIHSTLSASTSVGVDIQAEQRHERCNQCFIELTKVKHYL 361 MDR ISL+MLLKLV+ FGS+I+STLSASTSVGVDI+AEQR ERCN CF+EL KVK L Sbjct: 644 MDRHSSISLDMLLKLVRTFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCL 703 Query: 362 PSLTRWGGSVAKSAHELNLVLQEV 433 +LTR GGSVAK A ELNL LQEV Sbjct: 704 LTLTRKGGSVAKYAQELNLALQEV 727 >ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis] gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative [Ricinus communis] Length = 803 Score = 182 bits (461), Expect = 8e-44 Identities = 91/142 (64%), Positives = 111/142 (78%) Frame = +2 Query: 5 LRRYLGRNDIKGAINAMEKMADHAVSADLISILNEKTDIITLDICTCXXXXXXXXXDSKM 184 + R+ RND+KGAI+AMEKMADH V AD+IS++NEK DI+TLD+CTC +S M Sbjct: 660 VHRFWERNDVKGAISAMEKMADHGVLADVISVINEKIDIVTLDVCTCLLPLLAGLLESDM 719 Query: 185 DRQLGISLEMLLKLVKIFGSVIHSTLSASTSVGVDIQAEQRHERCNQCFIELTKVKHYLP 364 DR L ISL++LLKLV+ FGS+I+ST+SAST VGVDI+AEQR ERCN CF+EL KVK LP Sbjct: 720 DRHLSISLDVLLKLVRTFGSMIYSTVSASTPVGVDIEAEQRLERCNLCFVELEKVKRCLP 779 Query: 365 SLTRWGGSVAKSAHELNLVLQE 430 +L R GGSVAK ELNL LQ+ Sbjct: 780 TLMRRGGSVAKITQELNLALQD 801