BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025300
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    78   3e-22
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    61   1e-17
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    87   5e-15
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    63   2e-14
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    60   3e-14

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 78.2 bits (191), Expect(2) = 3e-22
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 13/172 (7%)
 Frame = -2

Query: 767  RSLYSVTEKKIYNSEILIPD--NRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNEIHLPS 594
            R  YS    K+Y  EI +P+   ++   S YGW VT+  + D+ LLNP  L   +I LPS
Sbjct: 983  RGFYSPLSGKVY--EIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNP--LTRVQILLPS 1038

Query: 593  L-----------TSLDARLGQPYYVKKAILSANPISNSDFIVIAIYGGFRRIAFCKPGDR 447
            L           +S      +  ++ KA+LS+ P S+ D  V+ IY  + R+AF KPG +
Sbjct: 1039 LRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP-SSPDCAVMIIYSDYGRLAFTKPGHQ 1097

Query: 446  CWIKLDLAYTLMDDVICFRDQFYFVHWVGDVFSCELSHDSSDPKMSKVASSP 291
             W  L+     +DD+I F   F  V+   +V+ C++S   S  K  + A++P
Sbjct: 1098 TWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDIS--GSQLKTIRFAAAP 1147



 Score = 53.1 bits (126), Expect(2) = 3e-22
 Identities = 31/87 (35%), Positives = 43/87 (49%)
 Frame = -1

Query: 270  QSKYLVESFGXXXXXXXXXXXXXXXXXXDYFTRGFLVFNLDLIALKWVELKSICGRTIFL 91
            ++KYLVES G                     T  F V  LD+   +W E++++   + FL
Sbjct: 1158 EAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFL 1217

Query: 90   GDNSSFSVSAFDFPGCRPDCIYVTDDY 10
            G+N SFS  A D+P  R + IY TDDY
Sbjct: 1218 GNNHSFSTWASDYPEFRKNSIYFTDDY 1244


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 60.8 bits (146), Expect(2) = 1e-17
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = -1

Query: 183 YFTRGFLVFNLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDDYHE 4
           Y T GF VF ++   L W  ++++  R +F+G NSS S  A DF GC  DCIY TDDY E
Sbjct: 285 YRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE 344



 Score = 55.5 bits (132), Expect(2) = 1e-17
 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
 Frame = -2

Query: 698 IISSSYGW*VTVSKNNDVSLLNPFLLQNNEIH----LPSLTSLD-ARLGQPYYVK----- 549
           I  SS+GW V + +   + LLNP       +      P++ + D A +G+ Y ++     
Sbjct: 82  ICGSSHGWLVMLDETPQIRLLNPLTRATRPLPPLHAFPNVVAFDHANVGREYLIQNPYGG 141

Query: 548 ---------------KAILSANPISNSDFIVIAIYGGFRRIAFCKPGDRCWIKL---DLA 423
                          K +LSA+P  N DF  +AI G    +AFC+ G   WI L   +  
Sbjct: 142 LYAFNLRQMCNSFLGKVVLSASPTLNDDFAALAIVGQ-NNLAFCRNGYDSWIFLNGEEEE 200

Query: 422 YTLMDDVICFRDQFYFVHWVGDVFSCELSHDSSDPKMSKV-ASSPFFF 282
               +DV+ +   F+ V   G +  C+       P++S +  ++PF F
Sbjct: 201 MNCWEDVVNYNGLFFAVSKGGTIAVCDAGEGCFPPRVSIIQTTTPFGF 248


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
 Frame = -2

Query: 770 TRSLYSVTEKKIYNSEILIPDNRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNEIHLPSL 591
           +RS YS+T +K+    + +P       SS+GW +T  + N VSLL+PF  Q   I LP L
Sbjct: 202 SRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPFSRQ--VIRLPPL 259

Query: 590 TSLD----ARLGQPYYVKKAILSANPISN-SDFIVIAIYGGFRRIAFCKPGDRCWIKLDL 426
           T L        G  Y++ K +LSANP SN  DF+++ IYG  + +AF K GD+ W  +D 
Sbjct: 260 TRLKIPQRTVYGFEYHLHKGVLSANPTSNPDDFVLMVIYGHDKGLAFIKSGDQNWAYID- 318

Query: 425 AYTLMDDVICFRDQFYFV 372
           +  + DDV+   D  YF+
Sbjct: 319 SMVMKDDVL---DSPYFL 333


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 63.2 bits (152), Expect(2) = 2e-14
 Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
 Frame = -2

Query: 767 RSLYSVTEKKIYNSEILIPDNRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNEIHLPSLT 588
           R  Y++ + K Y+ E+     +    SS+GW V V     + LLNP  L    I LPSL+
Sbjct: 65  RGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIFLLNP--LTKARIELPSLS 122

Query: 587 SL----------DARLGQPY------------YVKKAILSANPISNSDFIVIAIY---GG 483
           +           ++R    Y            Y++KAI+S +P S  +F V+AIY     
Sbjct: 123 TFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDP-STGNFAVMAIYKTINS 181

Query: 482 FRRIAFCKPGDRCWIKLDLAYTLM--DDVICFRDQFYFVHWVGDVFSCELSHDSSDPKMS 309
              IAFCK GD  W  +      +   DV+  R +FY V   G V  C    D + P + 
Sbjct: 182 TENIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSIC--ITDINPPSVI 239

Query: 308 KVASSP 291
           +VA  P
Sbjct: 240 QVADPP 245



 Score = 42.4 bits (98), Expect(2) = 2e-14
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = -1

Query: 183 YFTRGFLVFNLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDD 13
           Y T  F+V+ LD  +  W+EL  +     FLG N   S+S  ++     +CIY TDD
Sbjct: 281 YQTHKFMVYKLDASSSNWLELDGLGDMLSFLGWNCFHSISTQNYRNYSGNCIYFTDD 337


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 60/194 (30%), Positives = 87/194 (44%), Gaps = 31/194 (15%)
 Frame = -2

Query: 779 DGPT-RSLYSVTEKKIYNSEILIPDNRFIISSSYGW*VTVSKNNDVSLLNPFLLQNNEIH 603
           D P  R  Y+ ++ K Y+ E+    ++    SS+GW V V     + LLNP  L  + I 
Sbjct: 60  DNPNHRGFYNPSDGKTYHLELPETVDKRCCGSSHGWLVMVEDTPSIFLLNP--LTKSRIE 117

Query: 602 LPSLTSL----------DARLGQPY------------YVKKAILSANPISNSDFIVIAIY 489
           LPSL++           ++R    Y            Y++KAI+S +P S   F+V+AIY
Sbjct: 118 LPSLSTFPNFPTEVIYQNSRNLNEYFIRNNKLRIRETYIRKAIVSEDP-SVGSFMVMAIY 176

Query: 488 ---GGFRRIAFCKPGDRCWI-----KLDLAYTLMDDVICFRDQFYFVHWVGDVFSCELSH 333
               G   IAFCK GD           ++ Y    DV+  R +FY V+  G V  C    
Sbjct: 177 KTINGSENIAFCKSGDAALFTTQETSQEIHY---QDVMFHRGKFYMVNDKGRVSIC--IT 231

Query: 332 DSSDPKMSKVASSP 291
           D + P +  VA  P
Sbjct: 232 DINPPSVIHVADPP 245



 Score = 43.9 bits (102), Expect(2) = 3e-14
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = -1

Query: 183 YFTRGFLVFNLDLIALKWVELKSICGRTIFLGDNSSFSVSAFDFPGCRPDCIYVTDD 13
           Y T  F+V+ LD  +  W +L  +     FLG N   S+SA +   C  +CIY TDD
Sbjct: 281 YQTHKFIVYKLDSSSSNWSKLDGLGDMIFFLGWNCFDSISAHNCGNCSGNCIYFTDD 337