BLASTX nr result

ID: Coptis24_contig00025288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025288
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283515.1| PREDICTED: uncharacterized protein LOC100265...   410   e-112
ref|XP_002298049.1| predicted protein [Populus trichocarpa] gi|2...   395   e-107
ref|XP_002283528.1| PREDICTED: uncharacterized protein LOC100265...   395   e-107
ref|XP_002509766.1| conserved hypothetical protein [Ricinus comm...   391   e-106
ref|XP_004143924.1| PREDICTED: uncharacterized protein LOC101222...   384   e-104

>ref|XP_002283515.1| PREDICTED: uncharacterized protein LOC100265107 isoform 1 [Vitis
           vinifera] gi|297742559|emb|CBI34708.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  410 bits (1053), Expect = e-112
 Identities = 194/259 (74%), Positives = 208/259 (80%)
 Frame = +2

Query: 113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 292
           GTS FVIRWIN LTMLLA+ VIGFGVW++THHD CRK+LTLPVLGLG FI L+S+IGFMG
Sbjct: 4   GTSTFVIRWINFLTMLLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMG 63

Query: 293 AYKNXXXXXXXXXXXXXXXXXXXXVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 472
           A KN                    VFTVLAFIITNNGSGH+VAGLRYKEYQL+DYSSWF 
Sbjct: 64  ALKNNSILLWIYLIMLCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFL 123

Query: 473 KQLNNTENWKHLKSCLVKSEDCNNLPXXXXXXXXXXXGNLTPVEAGCCRPPSECGYPAIN 652
           KQLNNT NWKHLKSCLVKSEDCNNL              LTP+EAGCCRPPSECGYPA+N
Sbjct: 124 KQLNNTRNWKHLKSCLVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVN 183

Query: 653 ASYYDLSFRPISTNNDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 832
           ASYYDLSF PIS+N DCKLY+NSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV LFVVL
Sbjct: 184 ASYYDLSFHPISSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVVLFVVL 243

Query: 833 SFIYFVGCCARKNATRDHS 889
           S +Y VGCCAR+NAT   S
Sbjct: 244 SMVYLVGCCARRNATSSRS 262


>ref|XP_002298049.1| predicted protein [Populus trichocarpa] gi|222845307|gb|EEE82854.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  395 bits (1015), Expect = e-107
 Identities = 187/259 (72%), Positives = 207/259 (79%)
 Frame = +2

Query: 113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 292
           GTSNFVIRWIN LTMLLA+AVI FGVW++THHDSCR++LTLPVLGLG  I ++S+IGF+G
Sbjct: 4   GTSNFVIRWINFLTMLLAIAVIIFGVWMSTHHDSCRRSLTLPVLGLGAVIFVISIIGFLG 63

Query: 293 AYKNXXXXXXXXXXXXXXXXXXXXVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 472
           A K+                    VFTVLAFIITNNGSGHSV GLRYKEYQL+DYSSWF 
Sbjct: 64  ALKSNSILLWIYLVMLCIILVAILVFTVLAFIITNNGSGHSVPGLRYKEYQLQDYSSWFL 123

Query: 473 KQLNNTENWKHLKSCLVKSEDCNNLPXXXXXXXXXXXGNLTPVEAGCCRPPSECGYPAIN 652
           KQLNNT+NW  LKSCLVK++DCNNLP             LT +EAGCCRPPS CGYPA+N
Sbjct: 124 KQLNNTKNWNRLKSCLVKTDDCNNLPRKYKTIKQYKSAKLTAIEAGCCRPPSVCGYPAVN 183

Query: 653 ASYYDLSFRPISTNNDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 832
           ASYYDLSF PIS+N DCKLY+NSRA KCYNCDSCKAGVAQYMKTEWRVVAIFNV LFVVL
Sbjct: 184 ASYYDLSFHPISSNKDCKLYKNSRATKCYNCDSCKAGVAQYMKTEWRVVAIFNVILFVVL 243

Query: 833 SFIYFVGCCARKNATRDHS 889
           S IYFVGCCAR++A R HS
Sbjct: 244 SMIYFVGCCARRSAARSHS 262


>ref|XP_002283528.1| PREDICTED: uncharacterized protein LOC100265107 isoform 2 [Vitis
           vinifera]
          Length = 258

 Score =  395 bits (1014), Expect = e-107
 Identities = 189/259 (72%), Positives = 203/259 (78%)
 Frame = +2

Query: 113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 292
           GTS FVIRWIN LTMLLA+ VIGFGVW++THHD CRK+LTLPVLGLG FI L+S+IGFMG
Sbjct: 4   GTSTFVIRWINFLTMLLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMG 63

Query: 293 AYKNXXXXXXXXXXXXXXXXXXXXVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 472
           A KN                    VFTVLAFIITNNGSGH+VAGLRYKEYQL+DYSSWF 
Sbjct: 64  ALKNNSILLWIYLIMLCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFL 123

Query: 473 KQLNNTENWKHLKSCLVKSEDCNNLPXXXXXXXXXXXGNLTPVEAGCCRPPSECGYPAIN 652
           KQLNNT NWKHLKSCLVKSEDCNNL              LTP+EAGCCRPPSECGYPA+N
Sbjct: 124 KQLNNTRNWKHLKSCLVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVN 183

Query: 653 ASYYDLSFRPISTNNDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 832
           ASYYDLSF PIS+N DCKLY+NSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV      
Sbjct: 184 ASYYDLSFHPISSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV------ 237

Query: 833 SFIYFVGCCARKNATRDHS 889
           S +Y VGCCAR+NAT   S
Sbjct: 238 SMVYLVGCCARRNATSSRS 256


>ref|XP_002509766.1| conserved hypothetical protein [Ricinus communis]
           gi|223549665|gb|EEF51153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 266

 Score =  391 bits (1004), Expect = e-106
 Identities = 184/260 (70%), Positives = 205/260 (78%)
 Frame = +2

Query: 110 AGTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFM 289
           +GTSNFVIRWIN  TML+A+AVI FGVW++THHDSCR++LTLPVLGLG FI L+S+IGF+
Sbjct: 5   SGTSNFVIRWINFFTMLIAIAVIIFGVWMSTHHDSCRRSLTLPVLGLGAFIFLISIIGFL 64

Query: 290 GAYKNXXXXXXXXXXXXXXXXXXXXVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWF 469
           GA KN                    VFTVLAFIIT+N SGH+  GLRYKEYQL+DYSSWF
Sbjct: 65  GALKNNSILLWIYLIMLCIILVAILVFTVLAFIITDNASGHNAPGLRYKEYQLQDYSSWF 124

Query: 470 RKQLNNTENWKHLKSCLVKSEDCNNLPXXXXXXXXXXXGNLTPVEAGCCRPPSECGYPAI 649
            KQLNNT+NWK LKSCLVKSEDCNNL              LTP+EAGCCRPPS CGYPA+
Sbjct: 125 LKQLNNTQNWKRLKSCLVKSEDCNNLSKKYKTLKQYKSAKLTPIEAGCCRPPSGCGYPAV 184

Query: 650 NASYYDLSFRPISTNNDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVV 829
           NASY+DLSF P+S+N DCKLY+NSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV LFVV
Sbjct: 185 NASYFDLSFHPVSSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVILFVV 244

Query: 830 LSFIYFVGCCARKNATRDHS 889
           LS IYFVGCCAR+N     S
Sbjct: 245 LSMIYFVGCCARRNVAGGRS 264


>ref|XP_004143924.1| PREDICTED: uncharacterized protein LOC101222956 [Cucumis sativus]
           gi|449495842|ref|XP_004159961.1| PREDICTED:
           uncharacterized protein LOC101226746 [Cucumis sativus]
          Length = 264

 Score =  384 bits (987), Expect = e-104
 Identities = 177/259 (68%), Positives = 204/259 (78%)
 Frame = +2

Query: 113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 292
           GTS F+IRWIN LTM LA+ VI FG+W+ THHD CRK+LTLPV+GLGGFI +VS++GF+G
Sbjct: 4   GTSIFIIRWINFLTMFLAILVIIFGIWMGTHHDGCRKSLTLPVMGLGGFIFVVSIVGFLG 63

Query: 293 AYKNXXXXXXXXXXXXXXXXXXXXVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 472
           A KN                    VFTVLAFI+TNNGSGH VAGLRYKEYQL+DYS+WF 
Sbjct: 64  ALKNNSILLWIYLIMLCITLVGILVFTVLAFIVTNNGSGHDVAGLRYKEYQLQDYSTWFL 123

Query: 473 KQLNNTENWKHLKSCLVKSEDCNNLPXXXXXXXXXXXGNLTPVEAGCCRPPSECGYPAIN 652
           KQLNNTENW  LKSCLVKSEDCNNL              LTP+EAGCCRPPSECGYPA+N
Sbjct: 124 KQLNNTENWMRLKSCLVKSEDCNNLSKRYKTLKQYKLAKLTPMEAGCCRPPSECGYPAVN 183

Query: 653 ASYYDLSFRPISTNNDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 832
           ASYYDLSF P+++N+DCK+Y+NS+A+KCY+CDSCKAGVAQYMKTEWR+VAIFNV LFVVL
Sbjct: 184 ASYYDLSFHPVNSNHDCKVYKNSKAVKCYDCDSCKAGVAQYMKTEWRLVAIFNVILFVVL 243

Query: 833 SFIYFVGCCARKNATRDHS 889
             IY VGCCAR+ A R+ S
Sbjct: 244 LIIYLVGCCARRKAARNRS 262


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