BLASTX nr result
ID: Coptis24_contig00025273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00025273
(668 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera] 100 7e-29
emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera] 101 8e-28
emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera] 93 4e-27
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] 100 6e-27
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] 100 6e-27
>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
Length = 1201
Score = 99.8 bits (247), Expect(2) = 7e-29
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Frame = +3
Query: 3 PPLFLLAVEVLGRMISKANELNFIEGFRVGHDR---VLVSHLQYADDIVVFLCKDLSQLR 173
P LF+L +E L +IS+A E FI GF+ R V VSHL +ADD ++F D QL
Sbjct: 629 PYLFVLIMEALSSLISRAEENGFIRGFKATGRRGEGVSVSHLLFADDTLLFCEDDRDQLI 688
Query: 174 FLCRILCCFEVISGLRVNMEE---------------*SVWGC*HERC**DGWSHWVLYRI 308
F ++ CFEV+SGL++N+++ +V+GC ++
Sbjct: 689 FWKWVVICFEVVSGLKINLQKSEIIPIGGVEEVDRAAAVFGC----------------KV 732
Query: 309 SAL*VSWAS--SWCSIQVCYYVGTVE*NLYQKLEGWHGRYLSRGVRMILIKSSLSNLPVY 482
L ++ S + C VE +KL W +YLS+G R+ LIKS+LSNLP+Y
Sbjct: 733 GNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRLTLIKSTLSNLPIY 792
Query: 483 VMPLFRMPQSVVKRVERILGTF 548
M LF +P+ V R+E+I F
Sbjct: 793 FMSLFVIPRKVRLRLEKIQREF 814
Score = 53.5 bits (127), Expect(2) = 7e-29
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +2
Query: 539 RNFLWDDKEENHRYHLVNWKTGCMSKKNGGLGLQRIREFNSAL 667
R FLW D EE + HLV W+ C ++GGLGL+ +++FN AL
Sbjct: 812 REFLWGDMEERRKIHLVRWEVTCKDMRHGGLGLRYLKDFNHAL 854
>emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 101 bits (251), Expect(2) = 8e-28
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 20/202 (9%)
Frame = +3
Query: 3 PPLFLLAVEVLGRMISKANELNFIEGFRVGHDR---VLVSHLQYADDIVVFLCKDLSQLR 173
P LF+L +E L +IS+A E FI GF+ R VLVSHL +ADD ++F D QL
Sbjct: 1451 PYLFVLIMEGLSSLISRAEENGFIRGFKATGRRGEGVLVSHLLFADDTLLFCEDDRDQLI 1510
Query: 174 FLCRILCCFEVISGLRVNMEE---------------*SVWGC*HERC**DGWSHWVLYRI 308
F ++ CFEV+SGL++N+++ +V+GC ++
Sbjct: 1511 FWKWVVICFEVVSGLKINLQKSEIIPIGGVEEVDRVGAVFGC----------------KV 1554
Query: 309 SAL*VSWAS--SWCSIQVCYYVGTVE*NLYQKLEGWHGRYLSRGVRMILIKSSLSNLPVY 482
L ++ S + C VE +KL W +YLS+G R+ LIKS+LSNLP+Y
Sbjct: 1555 GNLPTNYLGLPLGASHKSCRVWDGVEERFKRKLAMWKKQYLSKGGRLTLIKSTLSNLPIY 1614
Query: 483 VMPLFRMPQSVVKRVERILGTF 548
M LF +P+ V R+E+I F
Sbjct: 1615 FMSLFVIPRKVRLRLEKIQXXF 1636
Score = 48.5 bits (114), Expect(2) = 8e-28
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 545 FLWDDKEENHRYHLVNWKTGCMSKKNGGLGLQRIREFNSAL 667
FLW D EE + HLV + C K++GGLGL+ +++FN AL
Sbjct: 1636 FLWGDMEERRKIHLVRXEVICKBKRHGGLGLRYLKDFNHAL 1676
>emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera]
Length = 843
Score = 93.2 bits (230), Expect(2) = 4e-27
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Frame = +3
Query: 3 PPLFLLAVEVLGRMISKANELNFIEGFRV---GHDRVLVSHLQYADDIVVFLCKDLSQLR 173
P LF+L +E +ISKA E FI GFRV + VSHL +ADD ++F + +QL
Sbjct: 279 PYLFVLIMEAFSSLISKAEEKGFIRGFRVMGRNGEGTSVSHLLFADDTLLFCEDNRNQLV 338
Query: 174 FLCRILCCFEVISGLRVNMEE---------------*SVWGC*HERC**DGWSHWVLYRI 308
F ++ CFE++SGL++N+++ +V+GC ++
Sbjct: 339 FWKWVVICFEMVSGLKINLKKSEIIPVGGVEDVDRVAAVFGC----------------KV 382
Query: 309 SAL*VSWAS--SWCSIQVCYYVGTVE*NLYQKLEGWHGRYLSRGVRMILIKSSLSNLPVY 482
L ++ C VE +KL W +YL +G R+ LIKS+LSNLP+Y
Sbjct: 383 GNLPTTYLGLPLRAPHNSCRVWDGVEERFKRKLATWKKQYLPKGGRLTLIKSTLSNLPIY 442
Query: 483 VMPLFRMPQSVVKRVERILGTF 548
M LF +P+ V R+E+I F
Sbjct: 443 FMSLFVLPRKVRIRLEKIQREF 464
Score = 54.3 bits (129), Expect(2) = 4e-27
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +2
Query: 539 RNFLWDDKEENHRYHLVNWKTGCMSKKNGGLGLQRIREFNSAL 667
R FLW D E R HLV W C KK GGLGL+ ++EFN AL
Sbjct: 462 REFLWGDVEGRRRIHLVRWTAICKDKKYGGLGLRHLKEFNHAL 504
>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
Length = 4128
Score = 100 bits (248), Expect(2) = 6e-27
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Frame = +3
Query: 3 PPLFLLAVEVLGRMISKANELNFIEGFRVG---HDRVLVSHLQYADDIVVFLCKDLSQLR 173
P LFLLA+E L +++S+A NFI GFRVG + ++VSHL +ADD ++F D QL+
Sbjct: 3049 PYLFLLAMEALSQLLSRARNGNFISGFRVGGRGSEGLVVSHLLFADDTLIFCDADADQLQ 3108
Query: 174 FLCRILCCFEVISGLRVNMEE---------------*SVWGC*HERC**DGWSHWVLYRI 308
+L FE ISGL+VN+ + +V GC +I
Sbjct: 3109 YLSWTFMWFEAISGLKVNLNKTEAIPVGEDIPMETLAAVLGC----------------KI 3152
Query: 309 SAL*VSW-----ASSWCSIQVCYYVGTVE*NLYQKLEGWHGRYLSRGVRMILIKSSLSNL 473
+L S+ + + SI+V VE ++L W +YLS+G R+ L+KS+LS+L
Sbjct: 3153 GSLPTSYLGLPLGAPYKSIRVW---DAVEERFRKRLSLWKRQYLSKGGRLTLLKSTLSSL 3209
Query: 474 PVYVMPLFRMPQSVVKRVERILGTF 548
P Y + LF +P+ V R+E+I F
Sbjct: 3210 PTYFLSLFVIPKRVCARLEKIQRDF 3234
Score = 46.6 bits (109), Expect(2) = 6e-27
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 539 RNFLWDDKEENHRYHLVNWKTGCMSKKNGGLGLQRIREFNSAL 667
R+FLW + HLV+WK C KK GGLG++ + FN AL
Sbjct: 3232 RDFLWGGGALEKKPHLVSWKVVCADKKKGGLGIRSLATFNKAL 3274
Score = 57.8 bits (138), Expect(2) = 3e-12
Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Frame = +3
Query: 156 DLSQLRFLCRILCCFEVISGLRVNMEE*SVWGC*HERC**DGWSHWVLYRISAL*VSWAS 335
D QLR+L +L FE ISGL VN ++ V I V +
Sbjct: 1365 DSGQLRYLSWVLLWFEAISGLXVNRDKSEV--------------------IPVGRVDYLE 1404
Query: 336 SWCSIQVCY-------YVG--------------TVE*NLYQKLEGWHGRYLSRGVRMILI 452
+ S+ C Y+G VE + L W +YLS+G R+ LI
Sbjct: 1405 NIVSVLGCRIGNLPSSYLGLPLGAPFKSPRVWDVVEERFRKCLSLWKRQYLSKGGRLTLI 1464
Query: 453 KSSLSNLPVYVMPLFRMPQSVVKRVERILGTF 548
KS+LS+LP+Y+M LF +P+ V R+E+I F
Sbjct: 1465 KSTLSSLPIYLMSLFVIPRKVCARIEKIQRDF 1496
Score = 39.7 bits (91), Expect(2) = 3e-12
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 539 RNFLWDDKEENHRYHLVNWKTGCMSKKNGGLGLQRIREFNSAL 667
R+FLW + HLVNW C + GGLG++ + N AL
Sbjct: 1494 RDFLWGGGALEKKPHLVNWSAVCTDMRQGGLGIRSLVALNRAL 1536
>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
Length = 1728
Score = 100 bits (248), Expect(2) = 6e-27
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 23/205 (11%)
Frame = +3
Query: 3 PPLFLLAVEVLGRMISKANELNFIEGFRVG---HDRVLVSHLQYADDIVVFLCKDLSQLR 173
P LFLLA+E L +++S+A NFI GFRVG + ++VSHL +ADD ++F D QL+
Sbjct: 729 PYLFLLAMEALSQLLSRARNGNFISGFRVGGRGSEGLVVSHLLFADDTLIFCDADADQLQ 788
Query: 174 FLCRILCCFEVISGLRVNMEE---------------*SVWGC*HERC**DGWSHWVLYRI 308
+L FE ISGL+VN+ + +V GC +I
Sbjct: 789 YLSWTFMWFEAISGLKVNLNKTEAIPVGEDIPMETLAAVLGC----------------KI 832
Query: 309 SAL*VSW-----ASSWCSIQVCYYVGTVE*NLYQKLEGWHGRYLSRGVRMILIKSSLSNL 473
+L S+ + + SI+V VE ++L W +YLS+G R+ L+KS+LS+L
Sbjct: 833 GSLPTSYLGLPLGAPYKSIRVW---DAVEERFRKRLSLWKRQYLSKGGRLTLLKSTLSSL 889
Query: 474 PVYVMPLFRMPQSVVKRVERILGTF 548
P Y + LF +P+ V R+E+I F
Sbjct: 890 PTYFLSLFVIPKRVCARLEKIQRDF 914
Score = 46.6 bits (109), Expect(2) = 6e-27
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 539 RNFLWDDKEENHRYHLVNWKTGCMSKKNGGLGLQRIREFNSAL 667
R+FLW + HLV+WK C KK GGLG++ + FN AL
Sbjct: 912 RDFLWGGGALEKKPHLVSWKVVCADKKKGGLGIRSLATFNKAL 954