BLASTX nr result
ID: Coptis24_contig00025269
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025269 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltra... 46 7e-09 emb|CBI31225.3| unnamed protein product [Vitis vinifera] 46 7e-09 ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable pol... 46 7e-09 ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucle... 46 7e-09 emb|CAN63450.1| hypothetical protein VITISV_037969 [Vitis vinifera] 46 1e-08 >ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltransferase [Vitis vinifera] Length = 946 Score = 46.2 bits (108), Expect(2) = 7e-09 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = +1 Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480 K +AL LE++ +TI TE+GYVSKDET AE + ++FEDE Sbjct: 336 KIPRRKALISLEEEVLTILTEEGYVSKDETLGTAETIQDLFEDE 379 Score = 38.5 bits (88), Expect(2) = 7e-09 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +3 Query: 297 IQEIAGADLVKALQIRNKIPRRKGFI 374 ++EIAG L K LQIRNKIPRRK I Sbjct: 319 VEEIAGQQLGKVLQIRNKIPRRKALI 344 >emb|CBI31225.3| unnamed protein product [Vitis vinifera] Length = 942 Score = 46.2 bits (108), Expect(2) = 7e-09 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = +1 Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480 K +AL LE++ +TI TE+GYVSKDET AE + ++FEDE Sbjct: 336 KIPRRKALISLEEEVLTILTEEGYVSKDETLGTAETIQDLFEDE 379 Score = 38.5 bits (88), Expect(2) = 7e-09 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +3 Query: 297 IQEIAGADLVKALQIRNKIPRRKGFI 374 ++EIAG L K LQIRNKIPRRK I Sbjct: 319 VEEIAGQQLGKVLQIRNKIPRRKALI 344 >ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Cucumis sativus] Length = 922 Score = 45.8 bits (107), Expect(2) = 7e-09 Identities = 24/44 (54%), Positives = 30/44 (68%) Frame = +1 Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480 K +ALS LE+K ITI TE+GYVS D TS E +P++ EDE Sbjct: 345 KIPRRKALSSLEEKVITILTEEGYVSLDTTSGGLEPIPDLVEDE 388 Score = 38.9 bits (89), Expect(2) = 7e-09 Identities = 23/52 (44%), Positives = 29/52 (55%) Frame = +3 Query: 210 RMLKPIRSPQTLILRSSPQNNTTKF*VCLIQEIAGADLVKALQIRNKIPRRK 365 +ML IR P L+ + ++EIAG +L K LQIRNKIPRRK Sbjct: 312 KMLDAIRLPPPLLYKH-------------VEEIAGNELEKVLQIRNKIPRRK 350 >ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Cucumis sativus] Length = 922 Score = 45.8 bits (107), Expect(2) = 7e-09 Identities = 24/44 (54%), Positives = 30/44 (68%) Frame = +1 Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480 K +ALS LE+K ITI TE+GYVS D TS E +P++ EDE Sbjct: 345 KIPRRKALSSLEEKVITILTEEGYVSLDTTSGGLEPIPDLVEDE 388 Score = 38.9 bits (89), Expect(2) = 7e-09 Identities = 23/52 (44%), Positives = 29/52 (55%) Frame = +3 Query: 210 RMLKPIRSPQTLILRSSPQNNTTKF*VCLIQEIAGADLVKALQIRNKIPRRK 365 +ML IR P L+ + ++EIAG +L K LQIRNKIPRRK Sbjct: 312 KMLDAIRLPPPLLYKH-------------VEEIAGNELEKVLQIRNKIPRRK 350 >emb|CAN63450.1| hypothetical protein VITISV_037969 [Vitis vinifera] Length = 124 Score = 46.2 bits (108), Expect(2) = 1e-08 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = +1 Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480 K +AL LE++ +TI TE+GYVSKDET AE + ++FEDE Sbjct: 37 KIPRRKALISLEEEVLTILTEEGYVSKDETLGTAETIQDLFEDE 80 Score = 37.7 bits (86), Expect(2) = 1e-08 Identities = 19/26 (73%), Positives = 19/26 (73%) Frame = +3 Query: 297 IQEIAGADLVKALQIRNKIPRRKGFI 374 I EIAG L K LQIRNKIPRRK I Sbjct: 20 IXEIAGQQLGKVLQIRNKIPRRKALI 45