BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025269
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltra...    46   7e-09
emb|CBI31225.3| unnamed protein product [Vitis vinifera]               46   7e-09
ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable pol...    46   7e-09
ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucle...    46   7e-09
emb|CAN63450.1| hypothetical protein VITISV_037969 [Vitis vinifera]    46   1e-08

>ref|XP_002270169.1| PREDICTED: polyribonucleotide nucleotidyltransferase [Vitis
           vinifera]
          Length = 946

 Score = 46.2 bits (108), Expect(2) = 7e-09
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480
           K    +AL  LE++ +TI TE+GYVSKDET   AE + ++FEDE
Sbjct: 336 KIPRRKALISLEEEVLTILTEEGYVSKDETLGTAETIQDLFEDE 379



 Score = 38.5 bits (88), Expect(2) = 7e-09
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +3

Query: 297 IQEIAGADLVKALQIRNKIPRRKGFI 374
           ++EIAG  L K LQIRNKIPRRK  I
Sbjct: 319 VEEIAGQQLGKVLQIRNKIPRRKALI 344


>emb|CBI31225.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score = 46.2 bits (108), Expect(2) = 7e-09
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480
           K    +AL  LE++ +TI TE+GYVSKDET   AE + ++FEDE
Sbjct: 336 KIPRRKALISLEEEVLTILTEEGYVSKDETLGTAETIQDLFEDE 379



 Score = 38.5 bits (88), Expect(2) = 7e-09
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +3

Query: 297 IQEIAGADLVKALQIRNKIPRRKGFI 374
           ++EIAG  L K LQIRNKIPRRK  I
Sbjct: 319 VEEIAGQQLGKVLQIRNKIPRRKALI 344


>ref|XP_004159640.1| PREDICTED: LOW QUALITY PROTEIN: probable polyribonucleotide
           nucleotidyltransferase 1, chloroplastic-like [Cucumis
           sativus]
          Length = 922

 Score = 45.8 bits (107), Expect(2) = 7e-09
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +1

Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480
           K    +ALS LE+K ITI TE+GYVS D TS   E +P++ EDE
Sbjct: 345 KIPRRKALSSLEEKVITILTEEGYVSLDTTSGGLEPIPDLVEDE 388



 Score = 38.9 bits (89), Expect(2) = 7e-09
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = +3

Query: 210 RMLKPIRSPQTLILRSSPQNNTTKF*VCLIQEIAGADLVKALQIRNKIPRRK 365
           +ML  IR P  L+ +              ++EIAG +L K LQIRNKIPRRK
Sbjct: 312 KMLDAIRLPPPLLYKH-------------VEEIAGNELEKVLQIRNKIPRRK 350


>ref|XP_004136660.1| PREDICTED: probable polyribonucleotide nucleotidyltransferase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 922

 Score = 45.8 bits (107), Expect(2) = 7e-09
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +1

Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480
           K    +ALS LE+K ITI TE+GYVS D TS   E +P++ EDE
Sbjct: 345 KIPRRKALSSLEEKVITILTEEGYVSLDTTSGGLEPIPDLVEDE 388



 Score = 38.9 bits (89), Expect(2) = 7e-09
 Identities = 23/52 (44%), Positives = 29/52 (55%)
 Frame = +3

Query: 210 RMLKPIRSPQTLILRSSPQNNTTKF*VCLIQEIAGADLVKALQIRNKIPRRK 365
           +ML  IR P  L+ +              ++EIAG +L K LQIRNKIPRRK
Sbjct: 312 KMLDAIRLPPPLLYKH-------------VEEIAGNELEKVLQIRNKIPRRK 350


>emb|CAN63450.1| hypothetical protein VITISV_037969 [Vitis vinifera]
          Length = 124

 Score = 46.2 bits (108), Expect(2) = 1e-08
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 349 KYQDERALSLLEDKDITIRTEQGYVSKDETSVAAELLPEVFEDE 480
           K    +AL  LE++ +TI TE+GYVSKDET   AE + ++FEDE
Sbjct: 37  KIPRRKALISLEEEVLTILTEEGYVSKDETLGTAETIQDLFEDE 80



 Score = 37.7 bits (86), Expect(2) = 1e-08
 Identities = 19/26 (73%), Positives = 19/26 (73%)
 Frame = +3

Query: 297 IQEIAGADLVKALQIRNKIPRRKGFI 374
           I EIAG  L K LQIRNKIPRRK  I
Sbjct: 20  IXEIAGQQLGKVLQIRNKIPRRKALI 45