BLASTX nr result

ID: Coptis24_contig00025260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025260
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 ...   183   1e-44
ref|XP_004146192.1| PREDICTED: COBW domain-containing protein 2-...   180   1e-43
ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-...   178   5e-43
ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus...   176   1e-42
ref|XP_002326575.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 [Vitis vinifera]
           gi|296088399|emb|CBI37390.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/95 (95%), Positives = 93/95 (97%)
 Frame = -2

Query: 285 GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDILMVNNGCLCC 106
           GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDI+MVNNGCLCC
Sbjct: 81  GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDIVMVNNGCLCC 140

Query: 105 TVRGDLVKMLLELGKKKRDQIDHIVIETTGLAKPA 1
           TVRGDLVKMLLEL KKKRD+ DHIVIETTGLAKPA
Sbjct: 141 TVRGDLVKMLLELVKKKRDKFDHIVIETTGLAKPA 175


>ref|XP_004146192.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
           gi|449512950|ref|XP_004164186.1| PREDICTED: COBW
           domain-containing protein 2-like [Cucumis sativus]
          Length = 424

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/94 (94%), Positives = 92/94 (97%)
 Frame = -2

Query: 285 GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDILMVNNGCLCC 106
           GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAE+I+MVNNGCLCC
Sbjct: 85  GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEEIVMVNNGCLCC 144

Query: 105 TVRGDLVKMLLELGKKKRDQIDHIVIETTGLAKP 4
           TVRGDLVKMLLEL KKKRD+ DHIVIETTGLAKP
Sbjct: 145 TVRGDLVKMLLELVKKKRDKFDHIVIETTGLAKP 178


>ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-like [Glycine max]
          Length = 424

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/95 (91%), Positives = 92/95 (96%)
 Frame = -2

Query: 285 GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDILMVNNGCLCC 106
           GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSS +E+I+MVNNGCLCC
Sbjct: 88  GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSASEEIIMVNNGCLCC 147

Query: 105 TVRGDLVKMLLELGKKKRDQIDHIVIETTGLAKPA 1
           TVRGDLVKMLLEL +KKRD+ DHIVIETTGLAKPA
Sbjct: 148 TVRGDLVKMLLELVRKKRDKFDHIVIETTGLAKPA 182


>ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus communis]
           gi|223541003|gb|EEF42561.1| prli-interacting factor l,
           putative [Ricinus communis]
          Length = 413

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/94 (91%), Positives = 91/94 (96%)
 Frame = -2

Query: 285 GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDILMVNNGCLCC 106
           GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSS ++DI+MVNNGCLCC
Sbjct: 72  GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSASDDIVMVNNGCLCC 131

Query: 105 TVRGDLVKMLLELGKKKRDQIDHIVIETTGLAKP 4
           TVRGDLVKMLLEL KK+RD+ DHIVIETTGLAKP
Sbjct: 132 TVRGDLVKMLLELVKKRRDKFDHIVIETTGLAKP 165


>ref|XP_002326575.1| predicted protein [Populus trichocarpa] gi|222833897|gb|EEE72374.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/94 (90%), Positives = 90/94 (95%)
 Frame = -2

Query: 285 GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSSVAEDILMVNNGCLCC 106
           GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHS+ ++DI+MVNNGCLCC
Sbjct: 78  GFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDIDGSLVASHSTASDDIIMVNNGCLCC 137

Query: 105 TVRGDLVKMLLELGKKKRDQIDHIVIETTGLAKP 4
           TVRGDLVKMLLEL KK RD+ DHIVIETTGLAKP
Sbjct: 138 TVRGDLVKMLLELAKKNRDKFDHIVIETTGLAKP 171


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