BLASTX nr result

ID: Coptis24_contig00025247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025247
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513617.1| conserved hypothetical protein [Ricinus comm...   194   2e-47
ref|XP_002276136.2| PREDICTED: WD repeat-containing protein 91 h...   193   3e-47
emb|CBI22591.3| unnamed protein product [Vitis vinifera]              193   3e-47
ref|XP_003555399.1| PREDICTED: WD repeat-containing protein 91 h...   191   1e-46
ref|XP_003535585.1| PREDICTED: WD repeat-containing protein 91-l...   191   2e-46

>ref|XP_002513617.1| conserved hypothetical protein [Ricinus communis]
           gi|223547525|gb|EEF49020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 655

 Score =  194 bits (492), Expect = 2e-47
 Identities = 89/126 (70%), Positives = 102/126 (80%)
 Frame = +1

Query: 1   GWPAHDSAISSVLFGHDETSIFSLGSDGKIFEWSLQNQGQIIWSRDCSRFCNYENARCCR 180
           GWPAHDSAI+S+LFG DETSIFSLGSDGKIFEWSLQNQG ++WSR CSRFC+ E ++ CR
Sbjct: 527 GWPAHDSAINSILFGPDETSIFSLGSDGKIFEWSLQNQGHVLWSRSCSRFCDPETSKHCR 586

Query: 181 HEMAFDSTXXXXXXXXXXXXXPIYQVRDHSKGWKTLPHSAAITTVDWHPTLPIFLTGSAD 360
           HEMA D+              PIYQVR ++ G +TLPHSAA+TTVDWHPTLPIFLTGSAD
Sbjct: 587 HEMAMDANGRRLLVTSAAVRAPIYQVRGYTNGLRTLPHSAAVTTVDWHPTLPIFLTGSAD 646

Query: 361 NSVRVT 378
           NSVRV+
Sbjct: 647 NSVRVS 652


>ref|XP_002276136.2| PREDICTED: WD repeat-containing protein 91 homolog [Vitis vinifera]
          Length = 264

 Score =  193 bits (490), Expect = 3e-47
 Identities = 89/126 (70%), Positives = 102/126 (80%)
 Frame = +1

Query: 1   GWPAHDSAISSVLFGHDETSIFSLGSDGKIFEWSLQNQGQIIWSRDCSRFCNYENARCCR 180
           GWPAHDSAISS+LFG DETSI+SLGSDGKI EWSL NQGQI+WSR+CSRFCN E++R  R
Sbjct: 136 GWPAHDSAISSLLFGPDETSIYSLGSDGKILEWSLHNQGQILWSRNCSRFCNIESSRHYR 195

Query: 181 HEMAFDSTXXXXXXXXXXXXXPIYQVRDHSKGWKTLPHSAAITTVDWHPTLPIFLTGSAD 360
           HEM+ D+              PIYQVR H+ GW+TLPH+AAITTVDWHPTLPI +TGSAD
Sbjct: 196 HEMSLDANGRRLLVTSGSVRAPIYQVRGHTSGWRTLPHTAAITTVDWHPTLPILVTGSAD 255

Query: 361 NSVRVT 378
           +SVRVT
Sbjct: 256 HSVRVT 261


>emb|CBI22591.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  193 bits (490), Expect = 3e-47
 Identities = 89/126 (70%), Positives = 102/126 (80%)
 Frame = +1

Query: 1   GWPAHDSAISSVLFGHDETSIFSLGSDGKIFEWSLQNQGQIIWSRDCSRFCNYENARCCR 180
           GWPAHDSAISS+LFG DETSI+SLGSDGKI EWSL NQGQI+WSR+CSRFCN E++R  R
Sbjct: 535 GWPAHDSAISSLLFGPDETSIYSLGSDGKILEWSLHNQGQILWSRNCSRFCNIESSRHYR 594

Query: 181 HEMAFDSTXXXXXXXXXXXXXPIYQVRDHSKGWKTLPHSAAITTVDWHPTLPIFLTGSAD 360
           HEM+ D+              PIYQVR H+ GW+TLPH+AAITTVDWHPTLPI +TGSAD
Sbjct: 595 HEMSLDANGRRLLVTSGSVRAPIYQVRGHTSGWRTLPHTAAITTVDWHPTLPILVTGSAD 654

Query: 361 NSVRVT 378
           +SVRVT
Sbjct: 655 HSVRVT 660


>ref|XP_003555399.1| PREDICTED: WD repeat-containing protein 91 homolog [Glycine max]
          Length = 138

 Score =  191 bits (485), Expect = 1e-46
 Identities = 90/127 (70%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   GWPAHDSAISSVLFGHDETSIFSLGSDGKIFEWSLQNQGQIIWSRDCSRFC-NYENARCC 177
           GWPAHDS+ISS+LFG DETSIFSLG DGKIFEWSLQNQGQI+WSRDCSRFC    +++ C
Sbjct: 9   GWPAHDSSISSILFGPDETSIFSLGCDGKIFEWSLQNQGQILWSRDCSRFCYPLNDSKYC 68

Query: 178 RHEMAFDSTXXXXXXXXXXXXXPIYQVRDHSKGWKTLPHSAAITTVDWHPTLPIFLTGSA 357
           RHEMA D+              PIYQV  H  GW+TLPH A IT VDWHPTLPIFLTGSA
Sbjct: 69  RHEMALDANGRRLLVTSSSFRAPIYQVHGHLSGWRTLPHGAPITAVDWHPTLPIFLTGSA 128

Query: 358 DNSVRVT 378
           DNSVRVT
Sbjct: 129 DNSVRVT 135


>ref|XP_003535585.1| PREDICTED: WD repeat-containing protein 91-like [Glycine max]
          Length = 631

 Score =  191 bits (484), Expect = 2e-46
 Identities = 90/127 (70%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
 Frame = +1

Query: 1   GWPAHDSAISSVLFGHDETSIFSLGSDGKIFEWSLQNQGQIIWSRDCSRFC-NYENARCC 177
           GWPAHDS+ISS+LFG DETSIFSLGSDGKIFEWSLQNQGQI+WSRD SRFC  + +++ C
Sbjct: 502 GWPAHDSSISSILFGPDETSIFSLGSDGKIFEWSLQNQGQILWSRDSSRFCYPFNDSKYC 561

Query: 178 RHEMAFDSTXXXXXXXXXXXXXPIYQVRDHSKGWKTLPHSAAITTVDWHPTLPIFLTGSA 357
           RHEMA D+              PIYQV  H  GW+TLPH A IT VDWHPTLPIFLTGSA
Sbjct: 562 RHEMALDANGRRLLVTSSSFRAPIYQVHGHLSGWRTLPHGAPITAVDWHPTLPIFLTGSA 621

Query: 358 DNSVRVT 378
           DNSVRVT
Sbjct: 622 DNSVRVT 628


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