BLASTX nr result

ID: Coptis24_contig00025223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025223
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877272.1| pectinesterase family protein [Arabidopsis l...   209   4e-52
emb|CBI29628.3| unnamed protein product [Vitis vinifera]              209   4e-52
emb|CAN60612.1| hypothetical protein VITISV_003251 [Vitis vinifera]   209   4e-52
ref|XP_002270616.1| PREDICTED: pectinesterase/pectinesterase inh...   209   4e-52
ref|XP_002326321.1| predicted protein [Populus trichocarpa] gi|2...   208   6e-52

>ref|XP_002877272.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323110|gb|EFH53531.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 527

 Score =  209 bits (532), Expect = 4e-52
 Identities = 109/229 (47%), Positives = 148/229 (64%), Gaps = 9/229 (3%)
 Frame = +1

Query: 1   LDLLDYTTTELIWTQSAVEKPIGGNTGTGVLGFDLKTWLSAALGNQDTCMDGFLGTSGSV 180
           +DLLD    EL W  SA + P G +  TG +G DL+TW+SAAL NQDTC+DGF GT+G +
Sbjct: 85  VDLLDSAAEELSWIISASQNPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGII 144

Query: 181 QNSIAGSLKNVTTQVKNVLGMV---------RPVRPRHAYNERKLGSTDFPPWMSANDRR 333
           +  +AG L  V T V+N+L MV         +P++  H   +   G + FP W+   DR+
Sbjct: 145 KKIVAGGLSRVGTTVRNLLTMVHSPPSKAKPKPIKA-HTMTKAHSGFSKFPSWVKPGDRK 203

Query: 334 LLEAPTTGLSADVVVATDGSGNFTSISDAISTAPDNSTHRFVIYIKKGVYRXXXXXXXXX 513
           LL+     + AD VVATDG+GNFT+ISDA+  APD ST R+VI++K+GVY          
Sbjct: 204 LLQTDNITV-ADAVVATDGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYEENVEIKKKK 262

Query: 514 XXLMIVGDGMNSTIVSAKLNVIDGCTTFKSATFAVVGIGFIARDIAFEN 660
             +MIVGDG+++T+++   + IDG TTF+SATFAV G GFI RDI F+N
Sbjct: 263 WNIMIVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIGRDITFQN 311


>emb|CBI29628.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  209 bits (532), Expect = 4e-52
 Identities = 106/225 (47%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
 Frame = +1

Query: 1   LDLLDYTTTELIWTQSAVEKPIGGNTGTGVLGFDLKTWLSAALGNQDTCMDGFLGTSGSV 180
           L+LLD+   +L W+ SA++ P G + GTG LG DLKTWLS+   NQDTC++GF+GT+G V
Sbjct: 89  LELLDFAADDLSWSLSAIQNPKGKDNGTGDLGSDLKTWLSSTFTNQDTCIEGFVGTNGIV 148

Query: 181 QNSIAGSLKNVTTQVKNVLGMVRPVRPRHAYNE-----RKLGSTDFPPWMSANDRRLLEA 345
           +  +A SL  V + V ++L MV    P+   N      + +GS DFP W+  + R+LL+A
Sbjct: 149 KTVVAESLSQVASLVHSLLTMVHDPAPKGKSNGGGGGVKHVGSGDFPSWVGKHSRKLLQA 208

Query: 346 PTTGLSADVVVATDGSGNFTSISDAISTAPDNSTHRFVIYIKKGVYRXXXXXXXXXXXLM 525
             + +S DV VA DG+GN+T++ DA+  APD S + +VIYIK+G+YR           LM
Sbjct: 209 --SSVSPDVTVAADGTGNYTTVMDAVQAAPDYSQNHYVIYIKQGIYRENVEIKKKKWNLM 266

Query: 526 IVGDGMNSTIVSAKLNVIDGCTTFKSATFAVVGIGFIARDIAFEN 660
           +VGDGM +T+++   + IDG TT+ SATFAV G GFIARD+ FEN
Sbjct: 267 MVGDGMGATVITGNRSYIDGWTTYASATFAVKGKGFIARDMTFEN 311


>emb|CAN60612.1| hypothetical protein VITISV_003251 [Vitis vinifera]
          Length = 534

 Score =  209 bits (532), Expect = 4e-52
 Identities = 106/225 (47%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
 Frame = +1

Query: 1   LDLLDYTTTELIWTQSAVEKPIGGNTGTGVLGFDLKTWLSAALGNQDTCMDGFLGTSGSV 180
           L+LLD+   +L W+ SA++ P G + GTG LG DLKTWLS+   NQDTC++GF+GT+G V
Sbjct: 93  LELLDFAADDLSWSLSAIQNPKGKDNGTGDLGSDLKTWLSSTFTNQDTCIEGFVGTNGIV 152

Query: 181 QNSIAGSLKNVTTQVKNVLGMVRPVRPRHAYNE-----RKLGSTDFPPWMSANDRRLLEA 345
           +  +A SL  V + V ++L MV    P+   N      + +GS DFP W+  + R+LL+A
Sbjct: 153 KTVVAESLSQVASLVHSLLTMVHDPAPKGKSNGGGGGVKHVGSGDFPSWVGKHSRKLLQA 212

Query: 346 PTTGLSADVVVATDGSGNFTSISDAISTAPDNSTHRFVIYIKKGVYRXXXXXXXXXXXLM 525
             + +S DV VA DG+GN+T++ DA+  APD S + +VIYIK+G+YR           LM
Sbjct: 213 --SSVSPDVTVAADGTGNYTTVMDAVQAAPDYSQNHYVIYIKQGIYRENVEIKKKKWNLM 270

Query: 526 IVGDGMNSTIVSAKLNVIDGCTTFKSATFAVVGIGFIARDIAFEN 660
           +VGDGM +T+++   + IDG TT+ SATFAV G GFIARD+ FEN
Sbjct: 271 MVGDGMGATVITGNRSYIDGWTTYASATFAVKGKGFIARDMTFEN 315


>ref|XP_002270616.1| PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B [Vitis
           vinifera] gi|15081598|gb|AAK81875.1| pectin
           methylesterase PME1 [Vitis vinifera]
          Length = 531

 Score =  209 bits (532), Expect = 4e-52
 Identities = 106/225 (47%), Positives = 149/225 (66%), Gaps = 5/225 (2%)
 Frame = +1

Query: 1   LDLLDYTTTELIWTQSAVEKPIGGNTGTGVLGFDLKTWLSAALGNQDTCMDGFLGTSGSV 180
           L+LLD+   +L W+ SA++ P G + GTG LG DLKTWLS+   NQDTC++GF+GT+G V
Sbjct: 93  LELLDFAADDLSWSLSAIQNPKGKDNGTGDLGSDLKTWLSSTFTNQDTCIEGFVGTNGIV 152

Query: 181 QNSIAGSLKNVTTQVKNVLGMVRPVRPRHAYNE-----RKLGSTDFPPWMSANDRRLLEA 345
           +  +A SL  V + V ++L MV    P+   N      + +GS DFP W+  + R+LL+A
Sbjct: 153 KTVVAESLSQVASLVHSLLTMVHDPAPKGKSNGGGGGVKHVGSGDFPSWVGKHSRKLLQA 212

Query: 346 PTTGLSADVVVATDGSGNFTSISDAISTAPDNSTHRFVIYIKKGVYRXXXXXXXXXXXLM 525
             + +S DV VA DG+GN+T++ DA+  APD S + +VIYIK+G+YR           LM
Sbjct: 213 --SSVSPDVTVAADGTGNYTTVMDAVQAAPDYSQNHYVIYIKQGIYRENVEIKKKKWNLM 270

Query: 526 IVGDGMNSTIVSAKLNVIDGCTTFKSATFAVVGIGFIARDIAFEN 660
           +VGDGM +T+++   + IDG TT+ SATFAV G GFIARD+ FEN
Sbjct: 271 MVGDGMGATVITGNRSYIDGWTTYASATFAVKGKGFIARDMTFEN 315


>ref|XP_002326321.1| predicted protein [Populus trichocarpa] gi|222833514|gb|EEE71991.1|
           predicted protein [Populus trichocarpa]
          Length = 520

 Score =  208 bits (530), Expect = 6e-52
 Identities = 111/225 (49%), Positives = 148/225 (65%), Gaps = 5/225 (2%)
 Frame = +1

Query: 1   LDLLDYTTTELIWTQSAVEKPIGGNTGTGVLGFDLKTWLSAALGNQDTCMDGFLGTSGSV 180
           LDLLD++  EL W+ SA + P G +  TG L  DL+TWLSAAL NQDTC++GF GT+  +
Sbjct: 82  LDLLDFSADELSWSMSASQNPNGKHNSTGDLSSDLRTWLSAALVNQDTCIEGFDGTNNIL 141

Query: 181 QNSIAGSLKNVTTQVKNVLGMVRPVRPRHA----YNERKLGSTD-FPPWMSANDRRLLEA 345
           +  ++GSL  +T+ V+ +L  V P     +    ++  K G+ D FP W+   DR+LL  
Sbjct: 142 KGLVSGSLNQITSSVQELLKNVDPHTNSKSSGGGFSGSKSGNNDRFPSWVKHEDRKLLVL 201

Query: 346 PTTGLSADVVVATDGSGNFTSISDAISTAPDNSTHRFVIYIKKGVYRXXXXXXXXXXXLM 525
              G++ +V+VA DG+GNFT I DA++ APD S HR +IYIKKGVY            LM
Sbjct: 202 --NGVTPNVIVAADGTGNFTKIMDAVAAAPDYSMHRHIIYIKKGVYNEYVDIKKKKWNLM 259

Query: 526 IVGDGMNSTIVSAKLNVIDGCTTFKSATFAVVGIGFIARDIAFEN 660
           +VG+GMN+TI++   N IDG TTF+SATFAV G GFIARDI FEN
Sbjct: 260 MVGEGMNATIITGNRNFIDGWTTFRSATFAVSGRGFIARDITFEN 304


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