BLASTX nr result

ID: Coptis24_contig00025214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025214
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA21928.1| ZPT4-4 [Petunia x hybrida]                             91   1e-16
ref|XP_002281438.2| PREDICTED: uncharacterized protein LOC100241...    79   5e-13
emb|CBI15163.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002514689.1| hypothetical protein RCOM_1470470 [Ricinus c...    79   5e-13
ref|XP_003525454.1| PREDICTED: uncharacterized protein LOC100781...    55   8e-06

>dbj|BAA21928.1| ZPT4-4 [Petunia x hybrida]
          Length = 477

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/56 (69%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
 Frame = +3

Query: 9   NHTIVIQQQLPEIRDFLDLNLPAPVEED-TSAHIGFKPWWAGNNHKHEQAVGLISN 173
           N  ++I++ +PEIRDFLDLNLPAPVEE+ TS H+GF+PWW G++HKHEQ VGLISN
Sbjct: 422 NQVVMIEKPIPEIRDFLDLNLPAPVEEESTSEHVGFQPWWIGSSHKHEQLVGLISN 477


>ref|XP_002281438.2| PREDICTED: uncharacterized protein LOC100241686 [Vitis vinifera]
          Length = 563

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/57 (64%), Positives = 43/57 (75%)
 Frame = +3

Query: 3   RGNHTIVIQQQLPEIRDFLDLNLPAPVEEDTSAHIGFKPWWAGNNHKHEQAVGLISN 173
           RG+ TIVI + LPEIRD LDLNLPAP EE+     GFK WW G++HKHE  VG+ISN
Sbjct: 511 RGSQTIVIPKPLPEIRDLLDLNLPAPAEEEG----GFKAWWVGSSHKHEPLVGMISN 563


>emb|CBI15163.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/57 (64%), Positives = 43/57 (75%)
 Frame = +3

Query: 3   RGNHTIVIQQQLPEIRDFLDLNLPAPVEEDTSAHIGFKPWWAGNNHKHEQAVGLISN 173
           RG+ TIVI + LPEIRD LDLNLPAP EE+     GFK WW G++HKHE  VG+ISN
Sbjct: 299 RGSQTIVIPKPLPEIRDLLDLNLPAPAEEEG----GFKAWWVGSSHKHEPLVGMISN 351


>ref|XP_002514689.1| hypothetical protein RCOM_1470470 [Ricinus communis]
           gi|223546293|gb|EEF47795.1| hypothetical protein
           RCOM_1470470 [Ricinus communis]
          Length = 557

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   RGNHTIVIQQQLPE-IRDFLDLNLPAPVEEDTSAHIGFKPWWAGNNHKHEQAVGLISN 173
           + + +I +Q+ +P  IRDFLDLNLPAP EE+++  +GF PWW  +NHKHEQ VGLISN
Sbjct: 500 KNDRSISVQESMPPPIRDFLDLNLPAPAEEESNGLVGFNPWWITSNHKHEQLVGLISN 557


>ref|XP_003525454.1| PREDICTED: uncharacterized protein LOC100781747 [Glycine max]
          Length = 997

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +3

Query: 3   RGNHTIVIQQQLPEIRDFLDLNLPAPVEEDTSAHI---GFKPWW-AGNNHKHE 149
           R   TIV+Q+ + EIRDFLDLNLPA  EE++++H      +PWW   +NHK E
Sbjct: 510 RSFQTIVLQEPVAEIRDFLDLNLPAATEEESNSHADSNSNRPWWIVEDNHKQE 562


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