BLASTX nr result

ID: Coptis24_contig00025212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025212
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19516.3| unnamed protein product [Vitis vinifera]              128   2e-27
emb|CAN75496.1| hypothetical protein VITISV_040890 [Vitis vinifera]   122   1e-25
ref|XP_003550338.1| PREDICTED: uncharacterized protein LOC100814...   113   1e-22
ref|XP_003544460.1| PREDICTED: uncharacterized protein LOC100781...   111   3e-22
ref|XP_002327142.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-21

>emb|CBI19516.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  128 bits (322), Expect = 2e-27
 Identities = 86/210 (40%), Positives = 115/210 (54%), Gaps = 25/210 (11%)
 Frame = -1

Query: 1146 SREWTNEKHSLYLDSMEASFVRQLH-----------------------MLSKQSNATSNQ 1036
            S EWT+EKHSLYL SMEASFV QL+                       ML K  N+ S Q
Sbjct: 38   SMEWTDEKHSLYLKSMEASFVDQLYNSLGLLGWHSQKENPSDSKPSLQMLCKTRNS-SGQ 96

Query: 1035 FKVLQSGSWKKISFEPAKPKTSTADDSRTLLENQWIRHFRYAGKHQEELALPNLQENGTE 856
            FKVL+ G W+KI+FE A+ +   AD S  LL N WI+HFR A +  E + LP  QENG+ 
Sbjct: 97   FKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQHFRSACR-DETVVLPAPQENGSS 155

Query: 855  FINSGELKMGLSGAVHRQKSASFGATMHSKKLCAGYSHQRDQDYVSSNAEVSDQNFVDDN 676
               +   +         +K++  G    SK+    + H R +D +S+N EVSDQNF+DD+
Sbjct: 156  TRKAVPSR--------GKKASPCGLATTSKQFPMYHCHLRQRDSLSTNTEVSDQNFLDDD 207

Query: 675  NEEVHMNNHLRAKKMRT--TDFPIKDQVVP 592
             E    N+ + AK+M+T   D  + DQVVP
Sbjct: 208  VEGGRENSLVSAKRMKTIVVDTCVNDQVVP 237


>emb|CAN75496.1| hypothetical protein VITISV_040890 [Vitis vinifera]
          Length = 467

 Score =  122 bits (307), Expect = 1e-25
 Identities = 83/207 (40%), Positives = 112/207 (54%), Gaps = 25/207 (12%)
 Frame = -1

Query: 1146 SREWTNEKHSLYLDSMEASFVRQLH-----------------------MLSKQSNATSNQ 1036
            S EWT+EKHSLYL SMEASFV QL+                       ML K  N+ S Q
Sbjct: 38   SMEWTDEKHSLYLKSMEASFVDQLYNSXGLLGWHSQKENPSDSKPSLQMLCKTRNS-SGQ 96

Query: 1035 FKVLQSGSWKKISFEPAKPKTSTADDSRTLLENQWIRHFRYAGKHQEELALPNLQENGTE 856
            FKVL+ G W+KI+FE A+ +   AD S  LL N WI+HFR A +  E + LP  QENG+ 
Sbjct: 97   FKVLRGGFWQKINFERARKQMVKADGSHVLLANPWIQHFRSACR-DETVVLPAPQENGSS 155

Query: 855  FINSGELKMGLSGAVHRQKSASFGATMHSKKLCAGYSHQRDQDYVSSNAEVSDQNFVDDN 676
               +   +         +K++  G    SK+    + H R +D +S+N EVSDQNF+DD+
Sbjct: 156  TRKAVPSR--------GKKASPCGLATTSKQFPMYHCHLRQRDSLSTNTEVSDQNFLDDD 207

Query: 675  NEEVHMNNHLRAKKMRT--TDFPIKDQ 601
             E    N+ + AK+M+T   D  + DQ
Sbjct: 208  VEGGRENSLVSAKRMKTIVVDTCVNDQ 234


>ref|XP_003550338.1| PREDICTED: uncharacterized protein LOC100814610 [Glycine max]
          Length = 226

 Score =  113 bits (282), Expect = 1e-22
 Identities = 74/195 (37%), Positives = 109/195 (55%), Gaps = 10/195 (5%)
 Frame = -1

Query: 1140 EWTNEKHSLYLDSMEASFVRQLHMLSKQSNA-----TSNQFKVLQSGSWKKISFEPAKPK 976
            EWT+EKHS+Y+ S+EASFV QL+   +   +     TS QFKVL+ G W+KI+FE   P+
Sbjct: 32   EWTDEKHSMYIKSIEASFVNQLYDSKQMKTSYDPATTSGQFKVLRGGCWQKINFERVNPQ 91

Query: 975  TSTADDSRTLLENQWIRHFRYAGKHQEELALPNLQENGT---EFINSGELKMGLSGAVHR 805
            TS  +    L EN WI+H+R + K Q  +A+ +LQE+ T   + ++ G+ K   SG+ H 
Sbjct: 92   TSRINQCHDLTENPWIQHYRSSSK-QRSIAVSSLQESVTTTSKVVDLGQRKGVPSGSGH- 149

Query: 804  QKSASFGATMHSKKLCAGYSHQRDQDYVSSNAEVSDQNFVDDNNEEVHMNNHLRAKKMRT 625
                     +H   LC      +D  Y  S+ E+SDQNFVD+  +    N   + K+ R+
Sbjct: 150  ---------LH---LCESRVCHKDMLY--SDTEMSDQNFVDEEVKGKKQNKKSKVKRQRS 195

Query: 624  --TDFPIKDQVVPLR 586
              +D    DQ+VP R
Sbjct: 196  LISDAQDNDQMVPNR 210


>ref|XP_003544460.1| PREDICTED: uncharacterized protein LOC100781222 [Glycine max]
          Length = 208

 Score =  111 bits (278), Expect = 3e-22
 Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
 Frame = -1

Query: 1140 EWTNEKHSLYLDSMEASFVRQLH-----MLSKQSNATSNQFKVLQSGSWKKISFEPAKPK 976
            EWT+EKHS+Y+ S+EASFV QL+       S  S  TS QFKVL+ G W+KI+FE   P+
Sbjct: 32   EWTDEKHSMYIKSIEASFVNQLYDSKQMKTSYDSATTSGQFKVLRGGCWQKINFERVNPQ 91

Query: 975  TSTADDSRTLLENQWIRHFRYAGKHQEELALPNLQENGT---EFINSGELKMGLSGAVHR 805
             S  +    L+EN WI+H+R++ K Q  +  P+LQE+ T     ++ G+ K   SG+ H 
Sbjct: 92   MSRINQCHDLMENPWIQHYRFSSK-QRSIVAPSLQESVTTTSNVVDLGQRKGVPSGSGHL 150

Query: 804  QKSASFGATMHSKKLCAGYSHQRDQDYVSSNAEVSDQNFVDDNNEEVHMNNHLRAKKMRT 625
                S        ++C        +D + S+ E+SDQNFVD+  +    N   + K+ R+
Sbjct: 151  HLCES--------RIC-------HKDMLCSDTEMSDQNFVDEEVKGKKQNKKSKVKRQRS 195


>ref|XP_002327142.1| predicted protein [Populus trichocarpa] gi|222835457|gb|EEE73892.1|
            predicted protein [Populus trichocarpa]
          Length = 254

 Score =  109 bits (273), Expect = 1e-21
 Identities = 82/212 (38%), Positives = 112/212 (52%), Gaps = 29/212 (13%)
 Frame = -1

Query: 1140 EWTNEKHSLYLDSMEASFVRQLHM-----------------LSKQSNAT----SNQFKVL 1024
            EWT+EKH+LYL SMEASFV QLH                  LS++ N      S +FKV 
Sbjct: 40   EWTDEKHNLYLKSMEASFVNQLHNSMDLLGWRSLKEGSVPNLSREVNCRTCTPSGEFKVH 99

Query: 1023 QSGSWKKISFEPAKPKTSTADDSRTLLENQWIRHFRYAGKHQEELALPNLQENGTE---F 853
            + G+W+KI+F   + + S+A +SR  L + WI+HF  A K  E++A P LQE   +    
Sbjct: 100  RRGNWQKINFRRPESQISSAKESRGFLTSPWIQHFTSARK-PEDVASPTLQECANQSRAT 158

Query: 852  INSGELKMGLSGAV---HRQKSASFGATMHSKKLCAGYSHQRDQDYVSSNAEVSDQNFVD 682
            I++G+  M    A+   H   S SF            Y H    D V SN E+SDQNFVD
Sbjct: 159  ISNGKKAMLCCPAISSKHYHLSNSF-----------SYHH----DLVDSNTEMSDQNFVD 203

Query: 681  DNNEEVHMNNHLRAKKMRT--TDFPIKDQVVP 592
            ++ +    ++ L +KKM+T  TD    DQVVP
Sbjct: 204  EDIKGEKASSSLSSKKMKTLKTDASGSDQVVP 235


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