BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025200
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889401.1| cytochrome c oxidase assembly protein CtaG [...   327   5e-87
ref|NP_171743.1| cytochrome c oxidase assembly protein CtaG / Co...   326   8e-87
gb|AAG00893.1|AC064879_11 Similar to cytochrome-c oxidase assemb...   322   1e-85
ref|XP_003553055.1| PREDICTED: cytochrome c oxidase assembly pro...   320   4e-85
ref|XP_004146871.1| PREDICTED: cytochrome c oxidase assembly pro...   316   6e-84

>ref|XP_002889401.1| cytochrome c oxidase assembly protein CtaG [Arabidopsis lyrata
           subsp. lyrata] gi|297335243|gb|EFH65660.1| cytochrome c
           oxidase assembly protein CtaG [Arabidopsis lyrata subsp.
           lyrata]
          Length = 287

 Score =  327 bits (837), Expect = 5e-87
 Identities = 170/235 (72%), Positives = 187/235 (79%)
 Frame = -3

Query: 906 SKSLISHKKLDTCPFFDFRRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLY 727
           S SL SH            R YS   + S  E KS+KML++L  +  GMVGLTYA+VPLY
Sbjct: 59  SWSLNSHSATAKSMLVSAHRQYS---TQSPTETKSQKMLYYLTAVVFGMVGLTYAAVPLY 115

Query: 726 RTFCQVTGYGGTVQRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQREV 547
           RTFCQ TGYGGTVQR+ETVEEKIARH++ GT   REIVVQFNADVADGMQWKF PTQREV
Sbjct: 116 RTFCQATGYGGTVQRKETVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREV 175

Query: 546 KVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDM 367
           +VKPGESALAFYTAEN+SS PITGVSTYNVTPMKAG YFNKIQCFCFEEQ LLPGEQIDM
Sbjct: 176 RVKPGESALAFYTAENKSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDM 235

Query: 366 PVFFYIDPEIETDPNMDGVNNLILSYTFFKVPDK*SCTDLVLVSFKFSSSPIQHS 202
           PVFFYIDPE ETDP MDG+NNLILSYTFFKV ++ + TD V  S   SS P+Q +
Sbjct: 236 PVFFYIDPEFETDPRMDGINNLILSYTFFKVSEE-NTTDTVNNS---SSVPVQET 286


>ref|NP_171743.1| cytochrome c oxidase assembly protein CtaG / Cox11 [Arabidopsis
           thaliana] gi|75151034|sp|Q8GWR0.1|COX11_ARATH RecName:
           Full=Cytochrome c oxidase assembly protein COX11,
           mitochondrial; Flags: Precursor
           gi|26452392|dbj|BAC43281.1| unknown protein [Arabidopsis
           thaliana] gi|28950841|gb|AAO63344.1| At1g02410
           [Arabidopsis thaliana] gi|332189306|gb|AEE27427.1|
           cytochrome c oxidase assembly protein CtaG / Cox11
           [Arabidopsis thaliana]
          Length = 287

 Score =  326 bits (835), Expect = 8e-87
 Identities = 173/257 (67%), Positives = 192/257 (74%), Gaps = 15/257 (5%)
 Frame = -3

Query: 990 IEPFSPTNKIPISISQYRYFT-----SRNNGFRSK----------SLISHKKLDTCPFFD 856
           +E    T++ P +I   RY+T     S  +  RSK          SL SH          
Sbjct: 16  LENLHRTSQYPRTILCSRYYTHGACKSNEHYLRSKRVFWGSSSSWSLNSHSATAKSMLDS 75

Query: 855 FRRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGGTVQRRE 676
             R YS  S S T   KS+KML++L  +  GMVGLTYA+VPLYRTFCQ TGYGGTVQR+E
Sbjct: 76  AHRQYSTHSPSET---KSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTVQRKE 132

Query: 675 TVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAFYTAENR 496
           TVEEKIARH++ GT   REIVVQFNADVADGMQWKF PTQREV+VKPGESALAFYTAEN+
Sbjct: 133 TVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENK 192

Query: 495 SSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIETDPNMD 316
           SS PITGVSTYNVTPMKAG YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE ETDP MD
Sbjct: 193 SSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMD 252

Query: 315 GVNNLILSYTFFKVPDK 265
           G+NNLILSYTFFKV ++
Sbjct: 253 GINNLILSYTFFKVSEE 269


>gb|AAG00893.1|AC064879_11 Similar to cytochrome-c oxidase assembly protein [Arabidopsis
           thaliana]
          Length = 216

 Score =  322 bits (824), Expect = 1e-85
 Identities = 155/189 (82%), Positives = 169/189 (89%)
 Frame = -3

Query: 831 SSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGGTVQRRETVEEKIAR 652
           S+ S  E KS+KML++L  +  GMVGLTYA+VPLYRTFCQ TGYGGTVQR+ETVEEKIAR
Sbjct: 10  STHSPSETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTVQRKETVEEKIAR 69

Query: 651 HAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAFYTAENRSSTPITGV 472
           H++ GT   REIVVQFNADVADGMQWKF PTQREV+VKPGESALAFYTAEN+SS PITGV
Sbjct: 70  HSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENKSSAPITGV 129

Query: 471 STYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIETDPNMDGVNNLILS 292
           STYNVTPMKAG YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE ETDP MDG+NNLILS
Sbjct: 130 STYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILS 189

Query: 291 YTFFKVPDK 265
           YTFFKV ++
Sbjct: 190 YTFFKVSEE 198


>ref|XP_003553055.1| PREDICTED: cytochrome c oxidase assembly protein COX11,
           mitochondrial-like [Glycine max]
          Length = 284

 Score =  320 bits (820), Expect = 4e-85
 Identities = 159/216 (73%), Positives = 178/216 (82%)
 Frame = -3

Query: 912 FRSKSLISHKKLDTCPFFDFRRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVP 733
           +RS +L S     +C    FR    + SS +++E+KSRKML +L GL   MVG TYA+VP
Sbjct: 73  YRSSALASQYVGKSCSMPGFR----HFSSHASKEQKSRKMLLYLTGLVFAMVGCTYAAVP 128

Query: 732 LYRTFCQVTGYGGTVQRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQR 553
           LYR FCQ TGYGGTV RRETVEEKIARH    T  TREIVVQFNAD+ADGMQWKF+PTQR
Sbjct: 129 LYRRFCQATGYGGTVTRRETVEEKIARHDSNNTVTTREIVVQFNADIADGMQWKFVPTQR 188

Query: 552 EVKVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQI 373
           EV+VKPGESALAFYTAEN+SSTPITGVSTYNVTPMKA  YFNKIQCFCFEEQ LLPGEQI
Sbjct: 189 EVRVKPGESALAFYTAENKSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQI 248

Query: 372 DMPVFFYIDPEIETDPNMDGVNNLILSYTFFKVPDK 265
           DMPVFFYIDPE ETDP M+G+NN+ILSYTFFKV ++
Sbjct: 249 DMPVFFYIDPEFETDPKMNGINNIILSYTFFKVSEE 284


>ref|XP_004146871.1| PREDICTED: cytochrome c oxidase assembly protein COX11,
           mitochondrial-like [Cucumis sativus]
           gi|449521983|ref|XP_004168008.1| PREDICTED: cytochrome c
           oxidase assembly protein COX11, mitochondrial-like
           [Cucumis sativus]
          Length = 333

 Score =  316 bits (810), Expect = 6e-84
 Identities = 163/221 (73%), Positives = 179/221 (80%), Gaps = 4/221 (1%)
 Frame = -3

Query: 915 GFRSKSLISH--KKLDTCPFFDFRRNYSYVSSSSTQ--ERKSRKMLWWLVGLGCGMVGLT 748
           GF S+S   H    L T     +   ++   S ST   ERKS+ ML++LV L   MVG +
Sbjct: 113 GFHSQSFQKHWFSPLSTRYIGRYSSLHNIQRSYSTAAIERKSKNMLFYLVALVLTMVGCS 172

Query: 747 YASVPLYRTFCQVTGYGGTVQRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKF 568
           YA+VPLYR FCQ TGYGGTVQRRE+VEEKIARHA+ GT  TR+IVVQFNADVADGM WKF
Sbjct: 173 YAAVPLYRRFCQATGYGGTVQRRESVEEKIARHAKDGTVTTRDIVVQFNADVADGMPWKF 232

Query: 567 IPTQREVKVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLL 388
           IPTQREV+VKPGESALAFYTAENRSSTPITGVSTYNVTPMKA  YFNKIQCFCFEEQ LL
Sbjct: 233 IPTQREVRVKPGESALAFYTAENRSSTPITGVSTYNVTPMKAAIYFNKIQCFCFEEQRLL 292

Query: 387 PGEQIDMPVFFYIDPEIETDPNMDGVNNLILSYTFFKVPDK 265
           PGEQIDMPVFFYIDPE ETDP MDG+NNLILSYTFFKV ++
Sbjct: 293 PGEQIDMPVFFYIDPEFETDPKMDGINNLILSYTFFKVSEE 333