BLASTX nr result

ID: Coptis24_contig00025193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025193
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305355.1| predicted protein [Populus trichocarpa] gi|2...   139   4e-31
emb|CBI27710.3| unnamed protein product [Vitis vinifera]              132   6e-29
ref|XP_002270002.1| PREDICTED: uncharacterized protein LOC100242...   132   6e-29
ref|XP_002518022.1| hypothetical protein RCOM_1176900 [Ricinus c...   130   2e-28
ref|XP_002325722.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28

>ref|XP_002305355.1| predicted protein [Populus trichocarpa]
           gi|224122642|ref|XP_002330432.1| predicted protein
           [Populus trichocarpa] gi|222848319|gb|EEE85866.1|
           predicted protein [Populus trichocarpa]
           gi|222871844|gb|EEF08975.1| predicted protein [Populus
           trichocarpa]
          Length = 129

 Score =  139 bits (351), Expect = 4e-31
 Identities = 75/122 (61%), Positives = 88/122 (72%)
 Frame = -3

Query: 488 DDASSSSGEEDVNISNGLXXXXXXXXXXXXXXXXXXKGPSDAIVDAMLEIAAASKLRANA 309
           DD SS SG+ DVN+ +G                   K   DAIVDAMLEIAAASK+RA A
Sbjct: 6   DDGSSGSGD-DVNMLDGHNKRQSVTPGGSGRGKRSRKATGDAIVDAMLEIAAASKMRAAA 64

Query: 308 MMRGNHQFSISNCVKVLDQVQGLDQRTYFAALDLFESPNAREIFISLKAEKRLTWLQGKC 129
           +M+   +FSIS C+KVLD++QG+DQR YF ALDLFE+PNAREIFISLK+EKRL WLQGKC
Sbjct: 65  IMKNEDRFSISKCIKVLDEMQGVDQRIYFLALDLFENPNAREIFISLKSEKRLPWLQGKC 124

Query: 128 NA 123
           NA
Sbjct: 125 NA 126


>emb|CBI27710.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  132 bits (332), Expect = 6e-29
 Identities = 71/127 (55%), Positives = 88/127 (69%)
 Frame = -3

Query: 488 DDASSSSGEEDVNISNGLXXXXXXXXXXXXXXXXXXKGPSDAIVDAMLEIAAASKLRANA 309
           +D SS SG+ DVN+ +G                   K   DAIVDAMLEIAAASK+RA A
Sbjct: 72  EDPSSGSGD-DVNMLDGHNKRQSVTQSSAGRRKRSRKATGDAIVDAMLEIAAASKMRATA 130

Query: 308 MMRGNHQFSISNCVKVLDQVQGLDQRTYFAALDLFESPNAREIFISLKAEKRLTWLQGKC 129
           +M+   +FSIS C+KVLD++QG+DQ  YF  LDLFE+PNARE FISLK+E+RL WLQGKC
Sbjct: 131 IMKSEDRFSISKCIKVLDEMQGVDQHVYFLTLDLFENPNARETFISLKSERRLAWLQGKC 190

Query: 128 NAHSISM 108
           +A S S+
Sbjct: 191 SASSGSV 197


>ref|XP_002270002.1| PREDICTED: uncharacterized protein LOC100242635 [Vitis vinifera]
          Length = 145

 Score =  132 bits (332), Expect = 6e-29
 Identities = 71/127 (55%), Positives = 88/127 (69%)
 Frame = -3

Query: 488 DDASSSSGEEDVNISNGLXXXXXXXXXXXXXXXXXXKGPSDAIVDAMLEIAAASKLRANA 309
           +D SS SG+ DVN+ +G                   K   DAIVDAMLEIAAASK+RA A
Sbjct: 16  EDPSSGSGD-DVNMLDGHNKRQSVTQSSAGRRKRSRKATGDAIVDAMLEIAAASKMRATA 74

Query: 308 MMRGNHQFSISNCVKVLDQVQGLDQRTYFAALDLFESPNAREIFISLKAEKRLTWLQGKC 129
           +M+   +FSIS C+KVLD++QG+DQ  YF  LDLFE+PNARE FISLK+E+RL WLQGKC
Sbjct: 75  IMKSEDRFSISKCIKVLDEMQGVDQHVYFLTLDLFENPNARETFISLKSERRLAWLQGKC 134

Query: 128 NAHSISM 108
           +A S S+
Sbjct: 135 SASSGSV 141


>ref|XP_002518022.1| hypothetical protein RCOM_1176900 [Ricinus communis]
           gi|223543004|gb|EEF44540.1| hypothetical protein
           RCOM_1176900 [Ricinus communis]
          Length = 354

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/122 (57%), Positives = 87/122 (71%)
 Frame = -3

Query: 488 DDASSSSGEEDVNISNGLXXXXXXXXXXXXXXXXXXKGPSDAIVDAMLEIAAASKLRANA 309
           +DASS SG+ D N+ +G                   K   DAIVDAMLEIAAASK+RA A
Sbjct: 14  EDASSGSGD-DRNMLDGHNKRQSSTPSASGRRKRSRKATGDAIVDAMLEIAAASKMRAAA 72

Query: 308 MMRGNHQFSISNCVKVLDQVQGLDQRTYFAALDLFESPNAREIFISLKAEKRLTWLQGKC 129
           +++   +FSIS C+KVLD++QG+DQRTYF +LDLFE+PNARE FISLK EKRL WLQGKC
Sbjct: 73  ILKNEDRFSISKCIKVLDEMQGVDQRTYFFSLDLFENPNARETFISLKNEKRLPWLQGKC 132

Query: 128 NA 123
           ++
Sbjct: 133 SS 134


>ref|XP_002325722.1| predicted protein [Populus trichocarpa] gi|222862597|gb|EEF00104.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  129 bits (323), Expect = 6e-28
 Identities = 70/122 (57%), Positives = 85/122 (69%)
 Frame = -3

Query: 488 DDASSSSGEEDVNISNGLXXXXXXXXXXXXXXXXXXKGPSDAIVDAMLEIAAASKLRANA 309
           +D SS SG+ DV + +G                   K   DAIVDAMLEIAAASK+RA A
Sbjct: 6   EDGSSGSGD-DVTMLDGHNKRQFVTPGGSGRGKRSRKATGDAIVDAMLEIAAASKMRAAA 64

Query: 308 MMRGNHQFSISNCVKVLDQVQGLDQRTYFAALDLFESPNAREIFISLKAEKRLTWLQGKC 129
           +M+   QFSIS C+KVLD++QG+DQ+ YF ALDLFE P AREIFI+LK+EKRL WLQGKC
Sbjct: 65  IMKNEDQFSISKCIKVLDEMQGVDQQIYFLALDLFEKPIAREIFIALKSEKRLPWLQGKC 124

Query: 128 NA 123
           +A
Sbjct: 125 SA 126


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