BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025187
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   241   6e-62
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   239   2e-61
ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|2...   227   9e-58
ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containi...   223   9e-57
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   220   1e-55

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  241 bits (614), Expect = 6e-62
 Identities = 111/161 (68%), Positives = 138/161 (85%)
 Frame = +1

Query: 1   PQRALDIFNTVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHEGLFI 180
           PQRAL+IFN V+ QRGF+HN++TY+ ILHKLA+SKKF+A+DA+L QM++ETCKFHEG+F+
Sbjct: 73  PQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFL 132

Query: 181 NLMTHFSKSCLHERIVEMLFAIQPIVRERPSLKAISTCLNLLIEAREIDLARNVLLELKE 360
           NLM HFSK  LHER+VEM  AI+PIVRE+PSLKAISTCLNLL+E+ ++DL R  LL  K+
Sbjct: 133 NLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKK 192

Query: 361 RSDFKPNTCVFNILVKYHCKKGDLDSAFEVVNEMKKGEKSY 483
             + +PNTC+FNILVK+HCK GD+DSAFEVV EMKK   SY
Sbjct: 193 SLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSY 233


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  239 bits (610), Expect = 2e-61
 Identities = 108/161 (67%), Positives = 137/161 (85%)
 Frame = +1

Query: 1   PQRALDIFNTVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHEGLFI 180
           PQ AL+IFN V  Q+GFNHNH+TYS ++HKLAQ+KKF AVDA+L QM++ETCKFHE +F+
Sbjct: 72  PQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFL 131

Query: 181 NLMTHFSKSCLHERIVEMLFAIQPIVRERPSLKAISTCLNLLIEAREIDLARNVLLELKE 360
           NLM HF KS LHER++EM +AIQPIVRE+PSLKAISTCLN+L+E+++IDLA+  LL + E
Sbjct: 132 NLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNE 191

Query: 361 RSDFKPNTCVFNILVKYHCKKGDLDSAFEVVNEMKKGEKSY 483
               +PNTC+FNILVK+HCK GDL+SA EV++EMKK  +SY
Sbjct: 192 HLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSY 232


>ref|XP_002301082.1| predicted protein [Populus trichocarpa] gi|222842808|gb|EEE80355.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/161 (66%), Positives = 131/161 (81%)
 Frame = +1

Query: 1   PQRALDIFNTVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHEGLFI 180
           PQ AL+IFN V  Q+GFNHNH+TYS I+ KLA++KKF+AVDA+LRQM +ETCKFHE LF+
Sbjct: 63  PQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETCKFHESLFL 122

Query: 181 NLMTHFSKSCLHERIVEMLFAIQPIVRERPSLKAISTCLNLLIEAREIDLARNVLLELKE 360
           NLM +F+KS   ER+VEM   IQPIVRE+PSLKAISTCLNLL+E++++DL R  LL+L +
Sbjct: 123 NLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLNK 182

Query: 361 RSDFKPNTCVFNILVKYHCKKGDLDSAFEVVNEMKKGEKSY 483
               KPNTC+FNI +KYHCK GDL+SAF VV EMKK   SY
Sbjct: 183 DHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISY 223


>ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
           gi|449497032|ref|XP_004160294.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  223 bits (569), Expect = 9e-57
 Identities = 99/161 (61%), Positives = 132/161 (81%)
 Frame = +1

Query: 1   PQRALDIFNTVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHEGLFI 180
           PQ ALDIFN VS Q+GFNHNH+TY+ I+  LA+ KKF+A+D +L QM+++TCK HEG+F+
Sbjct: 63  PQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFL 122

Query: 181 NLMTHFSKSCLHERIVEMLFAIQPIVRERPSLKAISTCLNLLIEAREIDLARNVLLELKE 360
           NLM HFSKS +HER+++M +AI+ IVRE+PSLKAISTCLNLL+E+  +DLAR +L+  + 
Sbjct: 123 NLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARS 182

Query: 361 RSDFKPNTCVFNILVKYHCKKGDLDSAFEVVNEMKKGEKSY 483
           + + +PNTC+FNILVK+HC+ GDL +AFEVV EMK    SY
Sbjct: 183 KLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSY 223


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  220 bits (560), Expect = 1e-55
 Identities = 103/161 (63%), Positives = 126/161 (78%)
 Frame = +1

Query: 1   PQRALDIFNTVSNQRGFNHNHSTYSIILHKLAQSKKFKAVDAILRQMSFETCKFHEGLFI 180
           PQ AL+IFN VS Q GF HN++TY+ IL KLA+   F AVD +L QM++ETCKFHEG+F+
Sbjct: 106 PQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFV 165

Query: 181 NLMTHFSKSCLHERIVEMLFAIQPIVRERPSLKAISTCLNLLIEAREIDLARNVLLELKE 360
           NLM HFSKS LHE+++   F+IQPIVRE+PS KA+STCLNLL+++  +DLAR +LL  K 
Sbjct: 166 NLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHAKR 225

Query: 361 RSDFKPNTCVFNILVKYHCKKGDLDSAFEVVNEMKKGEKSY 483
               KPN CVFNILVKYHCK GDLDSAFE+V EM+  E SY
Sbjct: 226 DLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSY 266