BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025179
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis...   135   3e-30
ref|XP_003547708.1| PREDICTED: ribosomal RNA-processing protein ...   134   1e-29
ref|XP_003553471.1| PREDICTED: ribosomal RNA-processing protein ...   132   3e-29
gb|ACU19283.1| unknown [Glycine max]                                  132   3e-29
ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29

>ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis]
           gi|223539379|gb|EEF40970.1| Cerebral protein, putative
           [Ricinus communis]
          Length = 264

 Score =  135 bits (341), Expect = 3e-30
 Identities = 59/77 (76%), Positives = 71/77 (92%)
 Frame = -3

Query: 233 TSFLEKMKARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHTGYQEQMSNWPEKP 54
           +SFLEKM+ARL+GGHFRM+NEKLYTCTG EAL+YFKD+P+LFDMYH GYQEQMS+WPE+P
Sbjct: 40  SSFLEKMRARLSGGHFRMLNEKLYTCTGDEALNYFKDDPSLFDMYHAGYQEQMSHWPEQP 99

Query: 53  VNVIIQWIKERSPYLVV 3
           VN+II W+K R+  LVV
Sbjct: 100 VNIIINWLKNRNSSLVV 116


>ref|XP_003547708.1| PREDICTED: ribosomal RNA-processing protein 8-like [Glycine max]
          Length = 262

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/77 (75%), Positives = 70/77 (90%)
 Frame = -3

Query: 233 TSFLEKMKARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHTGYQEQMSNWPEKP 54
           +SFLEKM+ARL+GGHFRMINEKLYTCTG EALDYFK+ P+LFD+YH GY+ QMSNWPE+P
Sbjct: 37  SSFLEKMRARLSGGHFRMINEKLYTCTGKEALDYFKEEPSLFDVYHAGYKTQMSNWPEQP 96

Query: 53  VNVIIQWIKERSPYLVV 3
           VNVII+W+K++SP   V
Sbjct: 97  VNVIIKWLKKQSPSFAV 113


>ref|XP_003553471.1| PREDICTED: ribosomal RNA-processing protein 8-like [Glycine max]
          Length = 262

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/77 (75%), Positives = 71/77 (92%)
 Frame = -3

Query: 233 TSFLEKMKARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHTGYQEQMSNWPEKP 54
           +SFL+KM+ARL+GGHFRMINEKLYTCTG EALDYFK+ P+LFD+YHTGY+ QMSNWPE+P
Sbjct: 37  SSFLQKMRARLSGGHFRMINEKLYTCTGEEALDYFKEEPSLFDVYHTGYKTQMSNWPEQP 96

Query: 53  VNVIIQWIKERSPYLVV 3
           VNVII+W+K++S   VV
Sbjct: 97  VNVIIKWLKKQSLSFVV 113


>gb|ACU19283.1| unknown [Glycine max]
          Length = 189

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/77 (75%), Positives = 71/77 (92%)
 Frame = -3

Query: 233 TSFLEKMKARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHTGYQEQMSNWPEKP 54
           +SFL+KM+ARL+GGHFRMINEKLYTCTG EALDYFK+ P+LFD+YHTGY+ QMSNWPE+P
Sbjct: 37  SSFLQKMRARLSGGHFRMINEKLYTCTGEEALDYFKEEPSLFDVYHTGYKTQMSNWPEQP 96

Query: 53  VNVIIQWIKERSPYLVV 3
           VNVII+W+K++S   VV
Sbjct: 97  VNVIIKWLKKQSLSFVV 113


>ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|222845806|gb|EEE83353.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/71 (81%), Positives = 67/71 (94%)
 Frame = -3

Query: 215 MKARLAGGHFRMINEKLYTCTGTEALDYFKDNPTLFDMYHTGYQEQMSNWPEKPVNVIIQ 36
           M+ARL+GGHFRMINEKLYTCTG EALDYFK++P+LFDMYHTGYQEQMS+WPE+PVN+IIQ
Sbjct: 1   MRARLSGGHFRMINEKLYTCTGDEALDYFKEDPSLFDMYHTGYQEQMSHWPEQPVNIIIQ 60

Query: 35  WIKERSPYLVV 3
           W+K RS  LVV
Sbjct: 61  WLKARSSSLVV 71