BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025175
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37538.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   123   2e-26
ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago t...   115   5e-24
ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...   114   8e-24
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>emb|CBI37538.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  123 bits (308), Expect = 2e-26
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = +2

Query: 2   LTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQLDASLFVEIEIGGKVVIEDPDGTF 181
           LTHAHKDHSSGI+ H++YPIYSTH+TKT++LQQYPQLD SLFV IE+G  +V++DPDG F
Sbjct: 62  LTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQLDDSLFVGIEVGQSMVVDDPDGRF 121

Query: 182 SVSAFDANHCP 214
            V+AFDANHCP
Sbjct: 122 GVTAFDANHCP 132


>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  123 bits (308), Expect = 2e-26
 Identities = 53/71 (74%), Positives = 64/71 (90%)
 Frame = +2

Query: 2   LTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQLDASLFVEIEIGGKVVIEDPDGTF 181
           LTHAHKDHSSGI+ H++YPIYSTH+TKT++LQQYPQLD SLFV IE+G  +V++DPDG F
Sbjct: 28  LTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQLDDSLFVGIEVGQSMVVDDPDGRF 87

Query: 182 SVSAFDANHCP 214
            V+AFDANHCP
Sbjct: 88  GVTAFDANHCP 98


>ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago truncatula]
           gi|355491660|gb|AES72863.1| DNA cross-link repair 1B
           protein [Medicago truncatula]
          Length = 571

 Score =  115 bits (287), Expect = 5e-24
 Identities = 48/71 (67%), Positives = 64/71 (90%)
 Frame = +2

Query: 2   LTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQLDASLFVEIEIGGKVVIEDPDGTF 181
           +THAHKDHSS IT+H+S+PIYST +TKT++LQ +PQLDASLF+ IE+G  ++++DPDG F
Sbjct: 29  ITHAHKDHSSNITSHSSFPIYSTSLTKTLLLQHHPQLDASLFLVIEVGQSLIVDDPDGNF 88

Query: 182 SVSAFDANHCP 214
           +V+AFDANHCP
Sbjct: 89  TVTAFDANHCP 99


>ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 553

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/72 (75%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = +2

Query: 2   LTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQLDASLFVEIEIGGKVVIEDPDGT- 178
           LTHAHKDHSS IT+H+SYPIYST++TKTI+LQQYPQLDASLF+ IE+G  +VI DP    
Sbjct: 27  LTHAHKDHSSSITSHSSYPIYSTNLTKTILLQQYPQLDASLFLNIELGQSLVIHDPAAAP 86

Query: 179 FSVSAFDANHCP 214
           F+VSAFDANHCP
Sbjct: 87  FTVSAFDANHCP 98


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/71 (70%), Positives = 58/71 (81%)
 Frame = +2

Query: 2   LTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQLDASLFVEIEIGGKVVIEDPDGTF 181
           LTHAHKDH+SGI  H+ YPIY+TH+TK +VLQ YPQL+ SLFV IE+G  VV  DPDG F
Sbjct: 28  LTHAHKDHTSGILTHSCYPIYATHLTKLLVLQNYPQLEGSLFVGIEVGESVVFNDPDGEF 87

Query: 182 SVSAFDANHCP 214
            V+AFDANHCP
Sbjct: 88  KVTAFDANHCP 98