BLASTX nr result

ID: Coptis24_contig00025173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025173
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinif...   285   7e-75
emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]   285   7e-75
ref|XP_004136208.1| PREDICTED: IWS1-like protein-like [Cucumis s...   273   5e-71
ref|XP_002303442.1| predicted protein [Populus trichocarpa] gi|2...   268   1e-69
ref|XP_002457368.1| hypothetical protein SORBIDRAFT_03g006180 [S...   267   3e-69

>ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinifera]
            gi|296086725|emb|CBI32360.3| unnamed protein product
            [Vitis vinifera]
          Length = 507

 Score =  285 bits (730), Expect = 7e-75
 Identities = 157/275 (57%), Positives = 193/275 (70%), Gaps = 1/275 (0%)
 Frame = +2

Query: 2    KRVEKTAGEIALWVEKVMAELELAVEEDGELNRKSMPAVNXXXXXXXXXXXXXXXXXXXE 181
            K+ EK+A EIAL VE VMAELE+  EED ELNR+S PA+N                   E
Sbjct: 228  KKNEKSAAEIALLVENVMAELEVTAEEDAELNRQSKPAINKLKKLPLLTEVLSKKQLQQE 287

Query: 182  FLDHGVLALLKYWLEPLPDGSLPNIAI*TAILEILSDYPIGLEESHKREELRKSSIGKVI 361
            FLDHGVL LLK WLEPLPDGSLPNI I  AIL IL+D+PI LE+  +RE+L+KS +GKVI
Sbjct: 288  FLDHGVLTLLKNWLEPLPDGSLPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVI 347

Query: 362  MFLSKYNEESTGNKMLARNLVYKWSRFIFCNSTRYDDMIHDDNEERLLYKKP-VKRPATG 538
            MFLSK +EE+T N+ LA++LV KWSR IF  STR++DM + D +ER+ +++P  K+P   
Sbjct: 348  MFLSKSDEETTANRKLAKDLVDKWSRPIFNKSTRFEDMRNFD-DERVPFRRPSAKKPMNK 406

Query: 539  PARLEYRDDDFGLANFQQRRKSSQPSSTQCVVRPEALPLDFVERPESKINPAEF*ARAAQ 718
             A +E RDDD  LA+  Q RKS Q SS     RPEA+PLDF+ RP+SKI+P E  ARA Q
Sbjct: 407  AAGMESRDDDLDLADLPQERKSGQSSSRLHASRPEAMPLDFIVRPQSKIDPDEIRARAKQ 466

Query: 719  MVHDQMRLRVGKKLQNLKAKNKRPLQAMNLSVEGR 823
            +V DQ RL++ KKLQ LKA  K+ LQA  LSVEGR
Sbjct: 467  VVQDQRRLKMNKKLQQLKAPKKKQLQATKLSVEGR 501


>emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]
          Length = 508

 Score =  285 bits (730), Expect = 7e-75
 Identities = 157/275 (57%), Positives = 193/275 (70%), Gaps = 1/275 (0%)
 Frame = +2

Query: 2    KRVEKTAGEIALWVEKVMAELELAVEEDGELNRKSMPAVNXXXXXXXXXXXXXXXXXXXE 181
            K+ EK+A EIAL VE VMAELE+  EED ELNR+S PA+N                   E
Sbjct: 229  KKNEKSAAEIALLVENVMAELEVTAEEDAELNRQSKPAINKLKKLPLLTEVLSKKQLQQE 288

Query: 182  FLDHGVLALLKYWLEPLPDGSLPNIAI*TAILEILSDYPIGLEESHKREELRKSSIGKVI 361
            FLDHGVL LLK WLEPLPDGSLPNI I  AIL IL+D+PI LE+  +RE+L+KS +GKVI
Sbjct: 289  FLDHGVLTLLKNWLEPLPDGSLPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVI 348

Query: 362  MFLSKYNEESTGNKMLARNLVYKWSRFIFCNSTRYDDMIHDDNEERLLYKKP-VKRPATG 538
            MFLSK +EE+T N+ LA++LV KWSR IF  STR++DM + D +ER+ +++P  K+P   
Sbjct: 349  MFLSKSDEETTANRKLAKDLVDKWSRPIFNKSTRFEDMRNFD-DERVPFRRPSAKKPMNK 407

Query: 539  PARLEYRDDDFGLANFQQRRKSSQPSSTQCVVRPEALPLDFVERPESKINPAEF*ARAAQ 718
             A +E RDDD  LA+  Q RKS Q SS     RPEA+PLDF+ RP+SKI+P E  ARA Q
Sbjct: 408  AAGMESRDDDLDLADLPQERKSGQSSSRLHASRPEAMPLDFIVRPQSKIDPDEIRARAKQ 467

Query: 719  MVHDQMRLRVGKKLQNLKAKNKRPLQAMNLSVEGR 823
            +V DQ RL++ KKLQ LKA  K+ LQA  LSVEGR
Sbjct: 468  VVQDQRRLKMNKKLQQLKAPKKKQLQATKLSVEGR 502


>ref|XP_004136208.1| PREDICTED: IWS1-like protein-like [Cucumis sativus]
            gi|449508046|ref|XP_004163201.1| PREDICTED: IWS1-like
            protein-like [Cucumis sativus]
          Length = 509

 Score =  273 bits (697), Expect = 5e-71
 Identities = 152/275 (55%), Positives = 188/275 (68%), Gaps = 1/275 (0%)
 Frame = +2

Query: 2    KRVEKTAGEIALWVEKVMAELELAVEEDGELNRKSMPAVNXXXXXXXXXXXXXXXXXXXE 181
            K+ EK+  EIAL VE VMAELE+  EED +LNR+  PAVN                   E
Sbjct: 230  KKNEKSPAEIALLVENVMAELEVTAEEDADLNRQGKPAVNKLKKLPLLTDVLSKKQLQQE 289

Query: 182  FLDHGVLALLKYWLEPLPDGSLPNIAI*TAILEILSDYPIGLEESHKREELRKSSIGKVI 361
            FLDHGVL LLK WLEPLPDGSLPNI I  AIL+IL+D+PI LE+  +RE+L+KS +GKVI
Sbjct: 290  FLDHGVLTLLKNWLEPLPDGSLPNINIREAILKILTDFPIDLEQYDRREQLKKSGLGKVI 349

Query: 362  MFLSKYNEESTGNKMLARNLVYKWSRFIFCNSTRYDDMIHDDNEERLLYKKPV-KRPATG 538
            MFLSK +EE+T N+ LA++LV +WSR IF  STR++DM  +  +ER+ +++P+ K+    
Sbjct: 350  MFLSKSDEETTSNRKLAKDLVDQWSRPIFNKSTRFEDM-RNVEDERVPFRRPLAKKSGNK 408

Query: 539  PARLEYRDDDFGLANFQQRRKSSQPSSTQCVVRPEALPLDFVERPESKINPAEF*ARAAQ 718
             A +E RD D  L  F Q RKS Q SS Q   RPEA PLDFV RP+SKI+P E  ARA Q
Sbjct: 409  AAGMESRDGDLDLDEFSQGRKSGQSSSRQHASRPEATPLDFVIRPQSKIDPDEIRARAKQ 468

Query: 719  MVHDQMRLRVGKKLQNLKAKNKRPLQAMNLSVEGR 823
             V DQ R+++ KKLQ LKA  K+ LQA  LSVEGR
Sbjct: 469  AVQDQRRMKMNKKLQQLKAPKKKQLQATKLSVEGR 503


>ref|XP_002303442.1| predicted protein [Populus trichocarpa] gi|222840874|gb|EEE78421.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  268 bits (685), Expect = 1e-69
 Identities = 149/277 (53%), Positives = 186/277 (67%)
 Frame = +2

Query: 2   KRVEKTAGEIALWVEKVMAELELAVEEDGELNRKSMPAVNXXXXXXXXXXXXXXXXXXXE 181
           K+ EK+  EIAL VE VMAELE+  EED +LNR+  PAVN                   E
Sbjct: 76  KKNEKSPAEIALLVENVMAELEVTAEEDADLNRQGKPAVNKLKKLPLLTEVLSKKQLQQE 135

Query: 182 FLDHGVLALLKYWLEPLPDGSLPNIAI*TAILEILSDYPIGLEESHKREELRKSSIGKVI 361
           F+DHGVL LLK WLEPLPDGSLPNI I  AIL+IL+D+PI LE+  +RE+L+KS +GKVI
Sbjct: 136 FIDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTDFPIDLEQYDRREQLKKSGLGKVI 195

Query: 362 MFLSKYNEESTGNKMLARNLVYKWSRFIFCNSTRYDDMIHDDNEERLLYKKPVKRPATGP 541
           MFLSK +EE+T N+ LA++LV KWSR IF  STR++DM  +  ++R   +  V+RP+   
Sbjct: 196 MFLSKSDEETTSNRKLAKDLVDKWSRPIFNKSTRFEDM-RNVEDDRAFRRPTVRRPSNNS 254

Query: 542 ARLEYRDDDFGLANFQQRRKSSQPSSTQCVVRPEALPLDFVERPESKINPAEF*ARAAQM 721
           A +  RD D  L +  + RKSSQ S  Q   RPEA PLDF+ RP+SKI+P E  ARA Q+
Sbjct: 255 AGMSSRDGDLDL-DISRERKSSQSSDRQHASRPEATPLDFLVRPQSKIDPEEVRARAKQV 313

Query: 722 VHDQMRLRVGKKLQNLKAKNKRPLQAMNLSVEGRHSL 832
           V DQ RL++ KKLQ LK   K+ LQA  LSVEGR  L
Sbjct: 314 VQDQRRLKMNKKLQQLKGPKKKQLQATKLSVEGRGML 350


>ref|XP_002457368.1| hypothetical protein SORBIDRAFT_03g006180 [Sorghum bicolor]
            gi|241929343|gb|EES02488.1| hypothetical protein
            SORBIDRAFT_03g006180 [Sorghum bicolor]
          Length = 518

 Score =  267 bits (682), Expect = 3e-69
 Identities = 146/275 (53%), Positives = 190/275 (69%), Gaps = 1/275 (0%)
 Frame = +2

Query: 2    KRVEKTAGEIALWVEKVMAELELAVEEDGELNRKSMPAVNXXXXXXXXXXXXXXXXXXXE 181
            K+ ++   +I L VE+ +AE E+A EED  LNR+S PA+N                   E
Sbjct: 240  KKNDRPRADIGLIVEQFIAEFEVAAEEDANLNRQSKPAINKLMKLPLLIDVLSKKNLQQE 299

Query: 182  FLDHGVLALLKYWLEPLPDGSLPNIAI*TAILEILSDYPIGLEESHKREELRKSSIGKVI 361
            FLDHGVL LLK WLEPLPDGS+PN+ I +A+L++L+D+PI LE+  +RE+L+KS +GKVI
Sbjct: 300  FLDHGVLTLLKNWLEPLPDGSMPNMNIRSAVLKLLTDFPIDLEQYDRREQLKKSGLGKVI 359

Query: 362  MFLSKYNEESTGNKMLARNLVYKWSRFIFCNSTRYDDMIHDDNEERLLYKKP-VKRPATG 538
            MFLSK +EE+T N+ LA+ LV KWSR IF  STR++DM   D +ER  Y++P +K+P++ 
Sbjct: 360  MFLSKSDEETTANRKLAKELVDKWSRPIFNKSTRFEDMRRYDEDERAPYRRPQMKKPSSS 419

Query: 539  PARLEYRDDDFGLANFQQRRKSSQPSSTQCVVRPEALPLDFVERPESKINPAEF*ARAAQ 718
             + +E RDDD   A+F Q RKS Q SS Q   RPEA PLDFV RP+SKI+P +  ARA Q
Sbjct: 420  SSGMESRDDDLD-ADFSQ-RKSGQSSSRQHASRPEASPLDFVIRPQSKIDPEQIRARAKQ 477

Query: 719  MVHDQMRLRVGKKLQNLKAKNKRPLQAMNLSVEGR 823
             V DQ RL++ KKLQ LKA  K+ LQA  LSVEGR
Sbjct: 478  AVQDQRRLKMNKKLQQLKAPKKKNLQASKLSVEGR 512


Top