BLASTX nr result

ID: Coptis24_contig00025157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025157
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27790.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   114   8e-24
ref|XP_003534951.1| PREDICTED: ATP-dependent DNA helicase Q-like...   102   3e-20
gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     102   4e-20
ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi...   101   7e-20

>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  119 bits (297), Expect = 3e-25
 Identities = 58/83 (69%), Positives = 67/83 (80%)
 Frame = -2

Query: 266 DKKAVPEALRETCKQRLSNALKQTQQRLGDLKINFEVSITLLEKECYTKYGNIGKTFYNS 87
           DK A+ EALRET KQRL NALKQTQQRLG+L+IN E S   LE ECY KYG  GK+FY S
Sbjct: 562 DKNAISEALRETSKQRLLNALKQTQQRLGNLEINLETSAIFLENECYKKYGKTGKSFYYS 621

Query: 86  QVASTVRWLSNSSSSEITRRLGT 18
           QVASTVRWLS ++S+++T RLGT
Sbjct: 622 QVASTVRWLSTANSTDLTNRLGT 644


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/84 (69%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
 Frame = -2

Query: 266 DKKAVPEALRETCKQRLSNALKQTQQRLGDLK-INFEVSITLLEKECYTKYGNIGKTFYN 90
           DK A+ EALRET KQRL NALKQTQQRLG+L+ IN E S   LE ECY KYG  GK+FY 
Sbjct: 545 DKNAISEALRETSKQRLLNALKQTQQRLGNLEEINLETSAIFLENECYKKYGKTGKSFYY 604

Query: 89  SQVASTVRWLSNSSSSEITRRLGT 18
           SQVASTVRWLS ++S+++T RLGT
Sbjct: 605 SQVASTVRWLSTANSTDLTNRLGT 628


>ref|XP_003534951.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Glycine max]
          Length = 732

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/82 (58%), Positives = 62/82 (75%)
 Frame = -2

Query: 269 LDKKAVPEALRETCKQRLSNALKQTQQRLGDLKINFEVSITLLEKECYTKYGNIGKTFYN 90
           +DK A+ + +R + +QRL NALKQ QQRL + KI  E S + LE+ECY KYG +GK+FY 
Sbjct: 541 VDKNAISDPMRGSSRQRLQNALKQVQQRLDNFKIEMETSASFLEEECYKKYGKVGKSFYY 600

Query: 89  SQVASTVRWLSNSSSSEITRRL 24
           SQVASTVRWL+ +SSSE+  RL
Sbjct: 601 SQVASTVRWLTTASSSELINRL 622


>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/83 (61%), Positives = 59/83 (71%)
 Frame = -2

Query: 269 LDKKAVPEALRETCKQRLSNALKQTQQRLGDLKINFEVSITLLEKECYTKYGNIGKTFYN 90
           +DK A+ E LRE  KQRL NALK   QRLG L I  + S + LE ECY KYG  GKTFY 
Sbjct: 546 VDKNAISETLREASKQRLLNALKVAHQRLGILNIELDTSASFLENECYKKYGKSGKTFYY 605

Query: 89  SQVASTVRWLSNSSSSEITRRLG 21
           SQVASTVRWLS+++  E+T RLG
Sbjct: 606 SQVASTVRWLSSTTLVELTNRLG 628


>ref|XP_002530733.1| DNA helicase, putative [Ricinus communis]
           gi|223529697|gb|EEF31639.1| DNA helicase, putative
           [Ricinus communis]
          Length = 718

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/84 (55%), Positives = 63/84 (75%)
 Frame = -2

Query: 266 DKKAVPEALRETCKQRLSNALKQTQQRLGDLKINFEVSITLLEKECYTKYGNIGKTFYNS 87
           DK A+ + LR++ KQRL NALKQ QQ+LG+L I  E S + LE ECY KYG  GK+FY S
Sbjct: 541 DKNAISDTLRQSSKQRLLNALKQAQQQLGNLSIELEASASYLENECYKKYGKSGKSFYYS 600

Query: 86  QVASTVRWLSNSSSSEITRRLGTT 15
           QVASTVRW+S ++ +++T RL ++
Sbjct: 601 QVASTVRWISTTNPTDLTNRLSSS 624


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