BLASTX nr result

ID: Coptis24_contig00025143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025143
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271142.1| PREDICTED: uncharacterized protein LOC100255...   250   1e-64
ref|XP_003525822.1| PREDICTED: uncharacterized protein LOC100815...   228   4e-58
ref|XP_002304420.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57
ref|XP_002525905.1| conserved hypothetical protein [Ricinus comm...   225   4e-57
ref|XP_003608729.1| hypothetical protein MTR_4g101100 [Medicago ...   219   2e-55

>ref|XP_002271142.1| PREDICTED: uncharacterized protein LOC100255799 [Vitis vinifera]
           gi|297741180|emb|CBI31911.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  250 bits (638), Expect = 1e-64
 Identities = 126/179 (70%), Positives = 150/179 (83%), Gaps = 4/179 (2%)
 Frame = -3

Query: 526 KLEKIQHQILKRITNLELS---NKFSTALSLQPTKQHSGPE-TTESLLSSILRSNGVYDF 359
           +LE++Q+++L+RI +LELS    +F+  LS+    Q S     TE+ LS+ILR+N V DF
Sbjct: 6   ELERVQNRVLQRIASLELSLLPQRFADTLSVSSPAQISDANGDTEARLSAILRANNVRDF 65

Query: 358 AFKRVPSHYYDTPLEARRDILDAPSVHHLCKSIVLVNTQAHESVTDCSDRNNSKYYVVVV 179
           AFKRVP  YYD P+EARRDIL APSVHHLCKSIVLVNTQA  +VTDCSDRNNSKYY+VVV
Sbjct: 66  AFKRVPFDYYDWPIEARRDILGAPSVHHLCKSIVLVNTQAPSNVTDCSDRNNSKYYIVVV 125

Query: 178 QYSARFSAETVKNFLYSVNNGKIPKKRFNLRLAPEEESTQLTGYKRNGVTCVGMKTDIP 2
           QY+ARF+AETVKNFLYS+NNGKIPKK+FNLRLAPEE S +LTGY+ NGVTC+GMKTDIP
Sbjct: 126 QYTARFNAETVKNFLYSLNNGKIPKKKFNLRLAPEESSQKLTGYEHNGVTCIGMKTDIP 184


>ref|XP_003525822.1| PREDICTED: uncharacterized protein LOC100815424 [Glycine max]
          Length = 228

 Score =  228 bits (581), Expect = 4e-58
 Identities = 118/175 (67%), Positives = 140/175 (80%)
 Frame = -3

Query: 526 KLEKIQHQILKRITNLELSNKFSTALSLQPTKQHSGPETTESLLSSILRSNGVYDFAFKR 347
           +LE++Q Q+L+RI+ LE S+  S + S   T + +  +T  + LSSILRSNGV DF+FKR
Sbjct: 9   ELERVQTQLLQRISKLERSHLPSPS-SQNDTVEDTATDTV-ARLSSILRSNGVPDFSFKR 66

Query: 346 VPSHYYDTPLEARRDILDAPSVHHLCKSIVLVNTQAHESVTDCSDRNNSKYYVVVVQYSA 167
           VPS YYD PLEARRD L A S+HHLCKSIVLVNTQA  +V DCSDR NSKYYVVVVQY+A
Sbjct: 67  VPSDYYDWPLEARRDALSAASIHHLCKSIVLVNTQAPANVVDCSDRKNSKYYVVVVQYTA 126

Query: 166 RFSAETVKNFLYSVNNGKIPKKRFNLRLAPEEESTQLTGYKRNGVTCVGMKTDIP 2
           RF+AE VKNFLYS+NNG I KK+FN+RLAPEE S +LTGY  N VTC+GMKTDIP
Sbjct: 127 RFNAEAVKNFLYSLNNGSIAKKKFNMRLAPEETSMELTGYGHNAVTCIGMKTDIP 181


>ref|XP_002304420.1| predicted protein [Populus trichocarpa] gi|222841852|gb|EEE79399.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  226 bits (577), Expect = 1e-57
 Identities = 117/180 (65%), Positives = 143/180 (79%), Gaps = 5/180 (2%)
 Frame = -3

Query: 526 KLEKIQHQILKRITNLELSNKFSTALSLQPTKQHS-----GPETTESLLSSILRSNGVYD 362
           +LE++Q +IL RI+ LELS      LS Q    ++     G +TTE+ LS+ILRSNGV D
Sbjct: 7   ELERLQTRILNRISKLELS------LSTQNNNNNNLSACDGGDTTEARLSTILRSNGVND 60

Query: 361 FAFKRVPSHYYDTPLEARRDILDAPSVHHLCKSIVLVNTQAHESVTDCSDRNNSKYYVVV 182
           FAFK+V S YYD PLE+RRD+L A S+ HLCKSIVLVNTQA  ++TDCSD NNSKYY+VV
Sbjct: 61  FAFKKVSSDYYDWPLESRRDVLGAASIDHLCKSIVLVNTQAPSNITDCSDCNNSKYYIVV 120

Query: 181 VQYSARFSAETVKNFLYSVNNGKIPKKRFNLRLAPEEESTQLTGYKRNGVTCVGMKTDIP 2
           VQY+ARF+AETVKN+LY++N+GKI KKRFNLRLAPEE S +LTGY  N VTC+GMKT+IP
Sbjct: 121 VQYTARFNAETVKNYLYALNDGKIAKKRFNLRLAPEETSMKLTGYGHNAVTCIGMKTNIP 180


>ref|XP_002525905.1| conserved hypothetical protein [Ricinus communis]
           gi|223534819|gb|EEF36509.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score =  225 bits (573), Expect = 4e-57
 Identities = 117/180 (65%), Positives = 142/180 (78%), Gaps = 5/180 (2%)
 Frame = -3

Query: 526 KLEKIQHQILKRITNLE---LSNKFSTALSLQPTKQH--SGPETTESLLSSILRSNGVYD 362
           +LE++Q  IL RI+ LE   L    S   SL P+ ++   G   TE+ LS+IL+SNGV D
Sbjct: 7   ELERVQTSILHRISMLERSLLHKNDSVFTSLTPSSRNVNCGGNDTEARLSAILKSNGVND 66

Query: 361 FAFKRVPSHYYDTPLEARRDILDAPSVHHLCKSIVLVNTQAHESVTDCSDRNNSKYYVVV 182
           F FKRVPS+YYD  L+ARRD+L A SV HLCKSIVLVNTQA  +V DCS+RNNSKYYVVV
Sbjct: 67  FVFKRVPSNYYDWSLDARRDVLCAASVDHLCKSIVLVNTQAPSNVIDCSNRNNSKYYVVV 126

Query: 181 VQYSARFSAETVKNFLYSVNNGKIPKKRFNLRLAPEEESTQLTGYKRNGVTCVGMKTDIP 2
           VQY+ARF+AETVKN+LY++N+GKI KK+FN+RLAPEE S QLTGY+ N VTC+GMKTDIP
Sbjct: 127 VQYNARFNAETVKNYLYALNDGKIAKKKFNMRLAPEETSVQLTGYEHNAVTCIGMKTDIP 186


>ref|XP_003608729.1| hypothetical protein MTR_4g101100 [Medicago truncatula]
           gi|355509784|gb|AES90926.1| hypothetical protein
           MTR_4g101100 [Medicago truncatula]
          Length = 234

 Score =  219 bits (558), Expect = 2e-55
 Identities = 116/181 (64%), Positives = 137/181 (75%), Gaps = 6/181 (3%)
 Frame = -3

Query: 526 KLEKIQHQILKRITNLELSNKFSTALSL-----QPTKQHSGPET-TESLLSSILRSNGVY 365
           +LE++Q Q+L+RI+ LE  + F     L       T   +  ET T S LSSIL +N V 
Sbjct: 7   ELERVQTQLLQRISKLEQDSHFPPNPPLINDPHTDTDTETETETETVSRLSSILHTNNVN 66

Query: 364 DFAFKRVPSHYYDTPLEARRDILDAPSVHHLCKSIVLVNTQAHESVTDCSDRNNSKYYVV 185
           DF+FKRV S YYD PLE+RRD L+A S+HHLCKSIVLVNTQA  +V DCSDRNNSKYYVV
Sbjct: 67  DFSFKRVASDYYDWPLESRRDALNAASIHHLCKSIVLVNTQAPANVVDCSDRNNSKYYVV 126

Query: 184 VVQYSARFSAETVKNFLYSVNNGKIPKKRFNLRLAPEEESTQLTGYKRNGVTCVGMKTDI 5
           VVQY+ARF+AE V+NFLYS+NNG I KK+FNLRLAPEE S +LTGY  N VTC+GMKTDI
Sbjct: 127 VVQYTARFNAEAVRNFLYSLNNGTIAKKKFNLRLAPEEISMELTGYGHNAVTCIGMKTDI 186

Query: 4   P 2
           P
Sbjct: 187 P 187


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