BLASTX nr result

ID: Coptis24_contig00025138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025138
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560605.1| PREDICTED: histidine kinase 4-like [Brachypo...    39   2e-06
gb|ABF98563.1| cytokinin receptor CRE1b, putative, expressed [Or...    37   6e-06
ref|XP_002527541.1| histidine kinase 1, 2, 3 plant, putative [Ri...    38   6e-06
tpd|FAA00250.1| TPA: histidine kinase [Oryza sativa Japonica Gro...    37   6e-06
gb|EEC76075.1| hypothetical protein OsI_13298 [Oryza sativa Indi...    37   6e-06

>ref|XP_003560605.1| PREDICTED: histidine kinase 4-like [Brachypodium distachyon]
          Length = 997

 Score = 38.9 bits (89), Expect(2) = 2e-06
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +3

Query: 171 ITLVVNVEDTRIEIPSHAQERVFT 242
           +TLVV+VEDT I IP HAQ+RVFT
Sbjct: 596 VTLVVSVEDTGIGIPIHAQDRVFT 619



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 20/47 (42%), Positives = 29/47 (61%)
 Frame = +1

Query: 31  SNEVGCGCLSDYEAADDRNYWKNFKLLVANEKLQFDHLGNDETSNTL 171
           S+ V    LS +EAAD RN W+NFKLL++ E  +  + G++    TL
Sbjct: 553 SSSVSHNTLSGFEAADSRNSWENFKLLLSYETNEMPY-GSESDKVTL 598


>gb|ABF98563.1| cytokinin receptor CRE1b, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 1013

 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  LSDYEAADDRNYWKNFKLLVANEK 126
           LS +EAAD RN W+NFKLL++ EK
Sbjct: 571 LSGFEAADSRNNWENFKLLLSYEK 594



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 171 ITLVVNVEDTRIEIPSHAQERVFT 242
           +TLVV+VEDT I IP HAQ RVFT
Sbjct: 606 VTLVVSVEDTGIGIPLHAQGRVFT 629


>ref|XP_002527541.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
           gi|223533091|gb|EEF34850.1| histidine kinase 1, 2, 3
           plant, putative [Ricinus communis]
          Length = 1011

 Score = 37.7 bits (86), Expect(2) = 6e-06
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +1

Query: 55  LSDYEAADDRNYWKNFKLLVANEKLQFDHLGNDETSN 165
           LS +EAADDRN W+ FK LVA+E  Q +   N  T+N
Sbjct: 566 LSGFEAADDRNGWEAFKHLVADEDFQSNGSLNVLTTN 602



 Score = 37.0 bits (84), Expect(2) = 6e-06
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 171 ITLVVNVEDTRIEIPSHAQERVF 239
           +TLVV+VEDT I IP HAQ+RVF
Sbjct: 608 VTLVVSVEDTGIGIPLHAQDRVF 630


>tpd|FAA00250.1| TPA: histidine kinase [Oryza sativa Japonica Group]
           gi|222625684|gb|EEE59816.1| hypothetical protein
           OsJ_12359 [Oryza sativa Japonica Group]
          Length = 1005

 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  LSDYEAADDRNYWKNFKLLVANEK 126
           LS +EAAD RN W+NFKLL++ EK
Sbjct: 563 LSGFEAADSRNNWENFKLLLSYEK 586



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 171 ITLVVNVEDTRIEIPSHAQERVFT 242
           +TLVV+VEDT I IP HAQ RVFT
Sbjct: 598 VTLVVSVEDTGIGIPLHAQGRVFT 621


>gb|EEC76075.1| hypothetical protein OsI_13298 [Oryza sativa Indica Group]
          Length = 923

 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 55  LSDYEAADDRNYWKNFKLLVANEK 126
           LS +EAAD RN W+NFKLL++ EK
Sbjct: 481 LSGFEAADSRNNWENFKLLLSYEK 504



 Score = 37.4 bits (85), Expect(2) = 6e-06
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +3

Query: 171 ITLVVNVEDTRIEIPSHAQERVFT 242
           +TLVV+VEDT I IP HAQ RVFT
Sbjct: 516 VTLVVSVEDTGIGIPLHAQGRVFT 539


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