BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025126
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43698.1| unknown [Medicago truncatula]                           60   2e-07
ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thalian...    59   3e-07
ref|XP_002876049.1| clathrin adaptor complex small chain family ...    58   9e-07
ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...    57   2e-06
ref|XP_003629449.1| AP-3 complex subunit sigma-2 [Medicago trunc...    57   2e-06

>gb|AFK43698.1| unknown [Medicago truncatula]
          Length = 166

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 329 MHMVLNEIIFGGQVLETSSAEVMKAVEEITKLE 231
           MH +L+EIIFGGQVLETSSAEV+KAVEEITKLE
Sbjct: 115 MHTILDEIIFGGQVLETSSAEVLKAVEEITKLE 147


>ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thaliana]
           gi|75161581|sp|Q8VZ37.1|AP3S_ARATH RecName: Full=AP-3
           complex subunit sigma; AltName: Full=AP-3 complex
           subunit sigma-3; AltName: Full=Adapter-related protein
           complex 3 sigma subunit; AltName: Full=Sigma-adaptin 3;
           AltName: Full=Sigma3-adaptin gi|17529106|gb|AAL38763.1|
           putative clathrin coat assembly protein [Arabidopsis
           thaliana] gi|20465749|gb|AAM20343.1| putative clathrin
           coat assembly protein [Arabidopsis thaliana]
           gi|332645198|gb|AEE78719.1| AP-3 complex subunit sigma
           [Arabidopsis thaliana]
          Length = 166

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = -2

Query: 329 MHMVLNEIIFGGQVLETSSAEVMKAVEEITKLE 231
           MH VL+EI+FGGQVLETSSAEVMKAVEEI+KLE
Sbjct: 115 MHAVLDEIVFGGQVLETSSAEVMKAVEEISKLE 147


>ref|XP_002876049.1| clathrin adaptor complex small chain family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321887|gb|EFH52308.1|
           clathrin adaptor complex small chain family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 329 MHMVLNEIIFGGQVLETSSAEVMKAVEEITKLE 231
           MH VL+EI+FGGQVLETSSAEV+KAVEEI+KLE
Sbjct: 115 MHAVLDEIVFGGQVLETSSAEVIKAVEEISKLE 147


>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -2

Query: 329 MHMVLNEIIFGGQVLETSSAEVMKAVEEITKLE 231
           +H +L+EIIFGGQVLETSSAEVMKAVEEI++LE
Sbjct: 115 LHTILDEIIFGGQVLETSSAEVMKAVEEISRLE 147


>ref|XP_003629449.1| AP-3 complex subunit sigma-2 [Medicago truncatula]
           gi|355523471|gb|AET03925.1| AP-3 complex subunit sigma-2
           [Medicago truncatula]
          Length = 214

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = -2

Query: 329 MHMVLNEIIFGGQVLETSSAEVMKAVEEITKLEK 228
           MH +L+EIIFGGQVLETSSAEV+KAVEEITK  K
Sbjct: 108 MHTILDEIIFGGQVLETSSAEVLKAVEEITKCLK 141