BLASTX nr result

ID: Coptis24_contig00025116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025116
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273048.1| PREDICTED: protein yippee-like isoform 1 [Vi...   192   3e-47
ref|XP_002312152.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|NP_001236973.1| uncharacterized protein LOC100305552 [Glycin...   186   2e-45
ref|XP_003530278.1| PREDICTED: protein yippee-like [Glycine max]      186   2e-45
emb|CAN76144.1| hypothetical protein VITISV_024928 [Vitis vinifera]   186   2e-45

>ref|XP_002273048.1| PREDICTED: protein yippee-like isoform 1 [Vitis vinifera]
           gi|225448394|ref|XP_002273272.1| PREDICTED: protein
           yippee-like isoform 2 [Vitis vinifera]
           gi|297736625|emb|CBI25496.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  192 bits (487), Expect = 3e-47
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = -1

Query: 318 MGRLYLVNLEGNFYSCKHCHTHLALSDQIMSKSFHCRHGRAYLFNKVVNVSLGENEERLM 139
           MGRL++V+LEG  YSCKHC THLALS+ I+SKSFHCRHG+AYLFNKVVNVS+G +EER+M
Sbjct: 1   MGRLFVVSLEGKIYSCKHCRTHLALSEDIVSKSFHCRHGKAYLFNKVVNVSVGVHEERMM 60

Query: 138 MTGMHTVADIFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKIS 1
           MTGMHTVADIFCVGCGS VGW+YE AHEKAQKYKEGK VLERFK+S
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWRYETAHEKAQKYKEGKSVLERFKVS 106


>ref|XP_002312152.1| predicted protein [Populus trichocarpa] gi|222851972|gb|EEE89519.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  187 bits (474), Expect = 1e-45
 Identities = 84/106 (79%), Positives = 95/106 (89%)
 Frame = -1

Query: 318 MGRLYLVNLEGNFYSCKHCHTHLALSDQIMSKSFHCRHGRAYLFNKVVNVSLGENEERLM 139
           MGRL++V+LEG  YSCKHC THLAL D I+SKSFHCRHG+AYLFNKV NV LGE EER+M
Sbjct: 1   MGRLFVVDLEGKIYSCKHCRTHLALYDDIVSKSFHCRHGKAYLFNKVANVFLGEKEERMM 60

Query: 138 MTGMHTVADIFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKIS 1
           +TG+HTVADIFCVGCGS VGWKYE AHE++QKYKEGK VLERFK+S
Sbjct: 61  ITGLHTVADIFCVGCGSIVGWKYETAHERSQKYKEGKSVLERFKVS 106


>ref|NP_001236973.1| uncharacterized protein LOC100305552 [Glycine max]
           gi|255625885|gb|ACU13287.1| unknown [Glycine max]
          Length = 129

 Score =  186 bits (472), Expect = 2e-45
 Identities = 84/106 (79%), Positives = 95/106 (89%)
 Frame = -1

Query: 318 MGRLYLVNLEGNFYSCKHCHTHLALSDQIMSKSFHCRHGRAYLFNKVVNVSLGENEERLM 139
           MGRL++VNLEG  YSCKHCHTHLAL D I S++FHCRHG+AYLFNKVVNVS+GE E+R M
Sbjct: 1   MGRLFVVNLEGKIYSCKHCHTHLALYDDIYSRTFHCRHGKAYLFNKVVNVSIGEMEDRPM 60

Query: 138 MTGMHTVADIFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKIS 1
           MTG+HTVADIFCVGCGS VGWKYE A+EK QKYKEGK VLER+K+S
Sbjct: 61  MTGLHTVADIFCVGCGSIVGWKYETAYEKNQKYKEGKSVLERYKVS 106


>ref|XP_003530278.1| PREDICTED: protein yippee-like [Glycine max]
          Length = 125

 Score =  186 bits (471), Expect = 2e-45
 Identities = 81/105 (77%), Positives = 95/105 (90%)
 Frame = -1

Query: 318 MGRLYLVNLEGNFYSCKHCHTHLALSDQIMSKSFHCRHGRAYLFNKVVNVSLGENEERLM 139
           MGRL+L+NLEGNFYSCKHC TH AL D I+SKSF CRHG+A+LF+KVVNV++GE EER+M
Sbjct: 1   MGRLFLINLEGNFYSCKHCQTHFALEDDIISKSFQCRHGKAFLFDKVVNVTVGEKEERMM 60

Query: 138 MTGMHTVADIFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFKI 4
           +TG+HTV DIFCV CGS VGW+YEAAHEK QKYKEGKF+LERFK+
Sbjct: 61  ITGLHTVVDIFCVVCGSIVGWRYEAAHEKTQKYKEGKFILERFKV 105


>emb|CAN76144.1| hypothetical protein VITISV_024928 [Vitis vinifera]
          Length = 129

 Score =  186 bits (471), Expect = 2e-45
 Identities = 84/104 (80%), Positives = 95/104 (91%)
 Frame = -1

Query: 318 MGRLYLVNLEGNFYSCKHCHTHLALSDQIMSKSFHCRHGRAYLFNKVVNVSLGENEERLM 139
           MGRL++V+LEG  YSCKHC THLALS+ I+SKSFHCRHG+AYLFNKVVNVS+G +EER+M
Sbjct: 1   MGRLFVVSLEGKIYSCKHCRTHLALSEDIVSKSFHCRHGKAYLFNKVVNVSVGVHEERMM 60

Query: 138 MTGMHTVADIFCVGCGSNVGWKYEAAHEKAQKYKEGKFVLERFK 7
           MTGMHTVADIFCVGCGS VGW+YE AHEKAQKYKEGK VLER +
Sbjct: 61  MTGMHTVADIFCVGCGSIVGWRYETAHEKAQKYKEGKSVLERLR 104


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