BLASTX nr result
ID: Coptis24_contig00025081
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025081 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301600.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-09 emb|CBI40813.3| unnamed protein product [Vitis vinifera] 65 6e-09 ref|XP_002262911.1| PREDICTED: small ubiquitin-related modifier ... 65 6e-09 ref|XP_002271938.1| PREDICTED: small ubiquitin-related modifier ... 65 6e-09 ref|XP_002321150.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-09 >ref|XP_002301600.1| predicted protein [Populus trichocarpa] gi|222843326|gb|EEE80873.1| predicted protein [Populus trichocarpa] Length = 105 Score = 63.2 bits (152), Expect(2) = 3e-09 Identities = 29/52 (55%), Positives = 38/52 (73%) Frame = +1 Query: 205 QDQTEVSFTIKSNVPLQKLMDAYCKERSVEVNSLRFMIDGKRLRGHQYTDDL 360 QD EV F IK + L+KLM+AYC +SVE+NS+ F+ DG+RLRG Q D+L Sbjct: 29 QDGNEVFFRIKRSTQLKKLMNAYCDRQSVEINSIAFLFDGRRLRGEQTPDEL 80 Score = 23.1 bits (48), Expect(2) = 3e-09 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +3 Query: 360 DGDTIDAFVEQWGGS 404 DGD IDA + Q GG+ Sbjct: 84 DGDEIDAMLHQTGGA 98 >emb|CBI40813.3| unnamed protein product [Vitis vinifera] Length = 91 Score = 65.1 bits (157), Expect = 6e-09 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 5/71 (7%) Frame = +1 Query: 205 QDQTEVSFTIKSNVPLQKLMDAYCKERSVEVNSLRFMIDGKRLRGHQYTDDLM-----EI 369 QD EV F IK + L+KLM AYC +SVE+NS+ F+ DG+RLRG Q D+L EI Sbjct: 14 QDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEI 73 Query: 370 RLMLLSNNGVA 402 ML GVA Sbjct: 74 DAMLHQTGGVA 84 >ref|XP_002262911.1| PREDICTED: small ubiquitin-related modifier 2 [Vitis vinifera] gi|296090483|emb|CBI40814.3| unnamed protein product [Vitis vinifera] Length = 103 Score = 65.1 bits (157), Expect = 6e-09 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 5/71 (7%) Frame = +1 Query: 205 QDQTEVSFTIKSNVPLQKLMDAYCKERSVEVNSLRFMIDGKRLRGHQYTDDLM-----EI 369 QD EV F IK + L+KLM AYC +SVE+NS+ F+ DG+RLRG Q D+L EI Sbjct: 31 QDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEI 90 Query: 370 RLMLLSNNGVA 402 ML GVA Sbjct: 91 DAMLHQTGGVA 101 >ref|XP_002271938.1| PREDICTED: small ubiquitin-related modifier 2 isoform 1 [Vitis vinifera] gi|147785046|emb|CAN71030.1| hypothetical protein VITISV_013543 [Vitis vinifera] Length = 114 Score = 65.1 bits (157), Expect = 6e-09 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 5/71 (7%) Frame = +1 Query: 205 QDQTEVSFTIKSNVPLQKLMDAYCKERSVEVNSLRFMIDGKRLRGHQYTDDLM-----EI 369 QD EV F IK + L+KLM AYC +SVE+NS+ F+ DG+RLRG Q D+L EI Sbjct: 37 QDGNEVFFRIKRSTQLRKLMSAYCDRQSVELNSIAFLFDGRRLRGEQTPDELEMEDGDEI 96 Query: 370 RLMLLSNNGVA 402 ML GVA Sbjct: 97 DAMLHQTGGVA 107 >ref|XP_002321150.1| predicted protein [Populus trichocarpa] gi|222861923|gb|EEE99465.1| predicted protein [Populus trichocarpa] Length = 103 Score = 61.6 bits (148), Expect(2) = 6e-09 Identities = 29/52 (55%), Positives = 37/52 (71%) Frame = +1 Query: 205 QDQTEVSFTIKSNVPLQKLMDAYCKERSVEVNSLRFMIDGKRLRGHQYTDDL 360 QD EV F IK + L+KLM+AYC +SVE NS+ F+ DG+RLRG Q D+L Sbjct: 29 QDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSIAFLFDGRRLRGEQTPDEL 80 Score = 23.5 bits (49), Expect(2) = 6e-09 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 360 DGDTIDAFVEQWGGSRSYS 416 DGD IDA + Q GG+ S Sbjct: 84 DGDEIDAMLHQTGGAMKTS 102