BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025063
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   382   e-104
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   366   3e-99
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   362   6e-98
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              355   4e-96
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   344   1e-92

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  382 bits (980), Expect = e-104
 Identities = 187/247 (75%), Positives = 212/247 (85%)
 Frame = +1

Query: 7   TSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVAKG 186
           +SLE+ LQDGKL RQ+NSLIVAHLRD++L+Q           PLN EAP NKLLELVAKG
Sbjct: 4   SSLEQTLQDGKLHRQLNSLIVAHLRDSSLTQAIASATMT---PLNVEAPPNKLLELVAKG 60

Query: 187 LAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKHETR 366
           LA E+DE  RG++   M D G ++PA YGS+P P+A +VDFS  QD KGSSK FSKHETR
Sbjct: 61  LAAEKDEMLRGVTSTAMYDLGTLLPAAYGSIPAPRAASVDFSAAQDTKGSSKNFSKHETR 120

Query: 367 HVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIRPVIRTFYD 546
           H+SEHKN+ARCARFSPDGR+VATGSADTSIKLFE+SKIKQMML D R+GP+RPVIRTFYD
Sbjct: 121 HLSEHKNIARCARFSPDGRFVATGSADTSIKLFEISKIKQMMLSDARDGPVRPVIRTFYD 180

Query: 547 HLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFHPSGEY 726
           H+QP+NDLDFHPQ+ VLISGAKDHTIKFFDFSKA AKKAFRVIQDTHNVRSVSFHPSG++
Sbjct: 181 HIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSVSFHPSGDF 240

Query: 727 LLAGTDH 747
           LLAGTDH
Sbjct: 241 LLAGTDH 247


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  366 bits (939), Expect = 3e-99
 Identities = 183/252 (72%), Positives = 209/252 (82%), Gaps = 3/252 (1%)
 Frame = +1

Query: 1   METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180
           ME +LE+ LQ+GKL RQ+N+LIVA+LRD NL+Q           PLN + P  KL++LVA
Sbjct: 1   MEPNLEQTLQEGKLYRQINALIVAYLRDYNLTQAASAVASATMTPLNVDTPPYKLIDLVA 60

Query: 181 KGLAVERDEASRGLSP-ATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKH 357
           KGLAVE+DE  +G  P A  LDSG V+P  YGS+P P+  AVDF  V D KGSSK+F KH
Sbjct: 61  KGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPRTVAVDFGAVHDTKGSSKSFPKH 120

Query: 358 ETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPD--TREGPIRPVI 531
           ETRHVSEHKN+ARCARFS DGR+VATGSAD SIKLFE+SKIKQMMLPD  TR+GP+RPVI
Sbjct: 121 ETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVI 180

Query: 532 RTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFH 711
           RTFYDH+QP+NDLDFHPQS VLISGAKDHTIKFFDFSK VAK+AFRVIQDTHNVRSVSFH
Sbjct: 181 RTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFH 240

Query: 712 PSGEYLLAGTDH 747
           PSG++LLAGTDH
Sbjct: 241 PSGDFLLAGTDH 252


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  362 bits (928), Expect = 6e-98
 Identities = 175/249 (70%), Positives = 202/249 (81%)
 Frame = +1

Query: 1   METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180
           ME S E+ LQDG+L RQVNSLIVAHLRD+NL+Q           PLN + P  KL+ELVA
Sbjct: 1   MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60

Query: 181 KGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKHE 360
           KGLAVE+DE  RG   + + + G  +P  +GS  P + +A+DFS  QD KGSSK F KHE
Sbjct: 61  KGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHE 120

Query: 361 TRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIRPVIRTF 540
           TRH+SEHKNVARCARFS DGR+VATGSAD SIKLFEV+KIKQMMLPD ++GP+RPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180

Query: 541 YDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFHPSG 720
           YDH+QP+NDLDFHPQ+ VL+SGAKDHTIKFFDFSK  AKKAFRVIQDTHNVRS+S HPSG
Sbjct: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240

Query: 721 EYLLAGTDH 747
           +YLLAGTDH
Sbjct: 241 DYLLAGTDH 249


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  355 bits (912), Expect = 4e-96
 Identities = 181/252 (71%), Positives = 207/252 (82%), Gaps = 3/252 (1%)
 Frame = +1

Query: 1   METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180
           ME +LE+ LQ+GKL RQ+N+LIVA+LRD NL+Q           PLN + P  KL++LVA
Sbjct: 46  MEPNLEQTLQEGKLYRQINALIVAYLRDYNLTQAASAVASATMTPLNVDTPPYKLIDLVA 105

Query: 181 KGLAVERDEASRGLSP-ATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKH 357
           KGLAVE+DE  +G  P A  LDSG V+P  YGS+P P+ T  D   V D KGSSK+F KH
Sbjct: 106 KGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPR-TGYDRFAVHDTKGSSKSFPKH 164

Query: 358 ETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPD--TREGPIRPVI 531
           ETRHVSEHKN+ARCARFS DGR+VATGSAD SIKLFE+SKIKQMMLPD  TR+GP+RPVI
Sbjct: 165 ETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVI 224

Query: 532 RTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFH 711
           RTFYDH+QP+NDLDFHPQS VLISGAKDHTIKFFDFSK VAK+AFRVIQDTHNVRSVSFH
Sbjct: 225 RTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFH 284

Query: 712 PSGEYLLAGTDH 747
           PSG++LLAGTDH
Sbjct: 285 PSGDFLLAGTDH 296


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  344 bits (882), Expect = 1e-92
 Identities = 168/249 (67%), Positives = 197/249 (79%)
 Frame = +1

Query: 1   METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180
           ME S E+ LQDG+L RQVNSLIVAHLRD+NL+Q           PLN + P  KL+ELVA
Sbjct: 1   MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60

Query: 181 KGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKHE 360
           KGLAVE+DE  RG   + + + G  +P  +GS  P + +A+DFS  QD KGSSK F KHE
Sbjct: 61  KGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHE 120

Query: 361 TRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIRPVIRTF 540
           TRH+SEHKNVARCARFS DGR+VATGSAD SIKLFEV  +  + +PD ++GP+RPVIRTF
Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEV--LIXLTIPDAKDGPVRPVIRTF 178

Query: 541 YDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFHPSG 720
           YDH+QP+NDLDFHPQ+ VL+SGAKDHTIKFFDFSK  AKKAFRVIQDTHNVRS+S HPSG
Sbjct: 179 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 238

Query: 721 EYLLAGTDH 747
           +YLLAGTDH
Sbjct: 239 DYLLAGTDH 247