BLASTX nr result
ID: Coptis24_contig00025063
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025063 (752 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ... 382 e-104 ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun... 366 3e-99 ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 362 6e-98 emb|CBI15329.3| unnamed protein product [Vitis vinifera] 355 4e-96 ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 344 1e-92 >ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus communis] gi|223546234|gb|EEF47736.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus communis] Length = 435 Score = 382 bits (980), Expect = e-104 Identities = 187/247 (75%), Positives = 212/247 (85%) Frame = +1 Query: 7 TSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVAKG 186 +SLE+ LQDGKL RQ+NSLIVAHLRD++L+Q PLN EAP NKLLELVAKG Sbjct: 4 SSLEQTLQDGKLHRQLNSLIVAHLRDSSLTQAIASATMT---PLNVEAPPNKLLELVAKG 60 Query: 187 LAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKHETR 366 LA E+DE RG++ M D G ++PA YGS+P P+A +VDFS QD KGSSK FSKHETR Sbjct: 61 LAAEKDEMLRGVTSTAMYDLGTLLPAAYGSIPAPRAASVDFSAAQDTKGSSKNFSKHETR 120 Query: 367 HVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIRPVIRTFYD 546 H+SEHKN+ARCARFSPDGR+VATGSADTSIKLFE+SKIKQMML D R+GP+RPVIRTFYD Sbjct: 121 HLSEHKNIARCARFSPDGRFVATGSADTSIKLFEISKIKQMMLSDARDGPVRPVIRTFYD 180 Query: 547 HLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFHPSGEY 726 H+QP+NDLDFHPQ+ VLISGAKDHTIKFFDFSKA AKKAFRVIQDTHNVRSVSFHPSG++ Sbjct: 181 HIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSVSFHPSGDF 240 Query: 727 LLAGTDH 747 LLAGTDH Sbjct: 241 LLAGTDH 247 >ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis vinifera] Length = 440 Score = 366 bits (939), Expect = 3e-99 Identities = 183/252 (72%), Positives = 209/252 (82%), Gaps = 3/252 (1%) Frame = +1 Query: 1 METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180 ME +LE+ LQ+GKL RQ+N+LIVA+LRD NL+Q PLN + P KL++LVA Sbjct: 1 MEPNLEQTLQEGKLYRQINALIVAYLRDYNLTQAASAVASATMTPLNVDTPPYKLIDLVA 60 Query: 181 KGLAVERDEASRGLSP-ATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKH 357 KGLAVE+DE +G P A LDSG V+P YGS+P P+ AVDF V D KGSSK+F KH Sbjct: 61 KGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPRTVAVDFGAVHDTKGSSKSFPKH 120 Query: 358 ETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPD--TREGPIRPVI 531 ETRHVSEHKN+ARCARFS DGR+VATGSAD SIKLFE+SKIKQMMLPD TR+GP+RPVI Sbjct: 121 ETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVI 180 Query: 532 RTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFH 711 RTFYDH+QP+NDLDFHPQS VLISGAKDHTIKFFDFSK VAK+AFRVIQDTHNVRSVSFH Sbjct: 181 RTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFH 240 Query: 712 PSGEYLLAGTDH 747 PSG++LLAGTDH Sbjct: 241 PSGDFLLAGTDH 252 >ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like [Cucumis sativus] Length = 437 Score = 362 bits (928), Expect = 6e-98 Identities = 175/249 (70%), Positives = 202/249 (81%) Frame = +1 Query: 1 METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180 ME S E+ LQDG+L RQVNSLIVAHLRD+NL+Q PLN + P KL+ELVA Sbjct: 1 MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60 Query: 181 KGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKHE 360 KGLAVE+DE RG + + + G +P +GS P + +A+DFS QD KGSSK F KHE Sbjct: 61 KGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHE 120 Query: 361 TRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIRPVIRTF 540 TRH+SEHKNVARCARFS DGR+VATGSAD SIKLFEV+KIKQMMLPD ++GP+RPVIRTF Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTF 180 Query: 541 YDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFHPSG 720 YDH+QP+NDLDFHPQ+ VL+SGAKDHTIKFFDFSK AKKAFRVIQDTHNVRS+S HPSG Sbjct: 181 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 240 Query: 721 EYLLAGTDH 747 +YLLAGTDH Sbjct: 241 DYLLAGTDH 249 >emb|CBI15329.3| unnamed protein product [Vitis vinifera] Length = 484 Score = 355 bits (912), Expect = 4e-96 Identities = 181/252 (71%), Positives = 207/252 (82%), Gaps = 3/252 (1%) Frame = +1 Query: 1 METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180 ME +LE+ LQ+GKL RQ+N+LIVA+LRD NL+Q PLN + P KL++LVA Sbjct: 46 MEPNLEQTLQEGKLYRQINALIVAYLRDYNLTQAASAVASATMTPLNVDTPPYKLIDLVA 105 Query: 181 KGLAVERDEASRGLSP-ATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKH 357 KGLAVE+DE +G P A LDSG V+P YGS+P P+ T D V D KGSSK+F KH Sbjct: 106 KGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPR-TGYDRFAVHDTKGSSKSFPKH 164 Query: 358 ETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPD--TREGPIRPVI 531 ETRHVSEHKN+ARCARFS DGR+VATGSAD SIKLFE+SKIKQMMLPD TR+GP+RPVI Sbjct: 165 ETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVI 224 Query: 532 RTFYDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFH 711 RTFYDH+QP+NDLDFHPQS VLISGAKDHTIKFFDFSK VAK+AFRVIQDTHNVRSVSFH Sbjct: 225 RTFYDHIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSFH 284 Query: 712 PSGEYLLAGTDH 747 PSG++LLAGTDH Sbjct: 285 PSGDFLLAGTDH 296 >ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like [Cucumis sativus] Length = 435 Score = 344 bits (882), Expect = 1e-92 Identities = 168/249 (67%), Positives = 197/249 (79%) Frame = +1 Query: 1 METSLEKILQDGKLLRQVNSLIVAHLRDNNLSQXXXXXXXXXXXPLNFEAPTNKLLELVA 180 ME S E+ LQDG+L RQVNSLIVAHLRD+NL+Q PLN + P KL+ELVA Sbjct: 1 MEGSFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVA 60 Query: 181 KGLAVERDEASRGLSPATMLDSGMVIPAGYGSVPPPKATAVDFSVVQDMKGSSKTFSKHE 360 KGLAVE+DE RG + + + G +P +GS P + +A+DFS QD KGSSK F KHE Sbjct: 61 KGLAVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHE 120 Query: 361 TRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEVSKIKQMMLPDTREGPIRPVIRTF 540 TRH+SEHKNVARCARFS DGR+VATGSAD SIKLFEV + + +PD ++GP+RPVIRTF Sbjct: 121 TRHLSEHKNVARCARFSADGRFVATGSADMSIKLFEV--LIXLTIPDAKDGPVRPVIRTF 178 Query: 541 YDHLQPVNDLDFHPQSPVLISGAKDHTIKFFDFSKAVAKKAFRVIQDTHNVRSVSFHPSG 720 YDH+QP+NDLDFHPQ+ VL+SGAKDHTIKFFDFSK AKKAFRVIQDTHNVRS+S HPSG Sbjct: 179 YDHIQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSISLHPSG 238 Query: 721 EYLLAGTDH 747 +YLLAGTDH Sbjct: 239 DYLLAGTDH 247