BLASTX nr result

ID: Coptis24_contig00025052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025052
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630933.1| Tau class glutathione S-transferase [Medicag...    60   1e-07
ref|XP_003628563.1| Multidrug resistance protein ABC transporter...    59   3e-07
ref|XP_003591547.1| ABC transporter C family protein [Medicago t...    58   7e-07
ref|XP_003591546.1| ABC transporter C family protein [Medicago t...    58   7e-07
ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4...    58   9e-07

>ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
            gi|355524955|gb|AET05409.1| Tau class glutathione
            S-transferase [Medicago truncatula]
          Length = 1320

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/39 (69%), Positives = 30/39 (76%)
 Frame = +1

Query: 1    CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117
            CFWK    T FLAVIRLC MYIGP+L+Q FV F+S KDS
Sbjct: 1028 CFWKHIAITGFLAVIRLCVMYIGPLLIQSFVDFTSRKDS 1066


>ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355522585|gb|AET03039.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1498

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/39 (66%), Positives = 30/39 (76%)
 Frame = +1

Query: 1   CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117
           CFWK    T FLA+IRLC MYIGP+L+Q FV F+S KDS
Sbjct: 316 CFWKHIAFTGFLAMIRLCVMYIGPLLIQSFVDFTSRKDS 354


>ref|XP_003591547.1| ABC transporter C family protein [Medicago truncatula]
           gi|355480595|gb|AES61798.1| ABC transporter C family
           protein [Medicago truncatula]
          Length = 1057

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117
           CFWKD + TAFLAVIRL  M++GPVL+Q FV F+S K S
Sbjct: 330 CFWKDIMFTAFLAVIRLSVMFVGPVLIQNFVDFTSGKGS 368


>ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula]
           gi|355480594|gb|AES61797.1| ABC transporter C family
           protein [Medicago truncatula]
          Length = 1515

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117
           CFWKD + TAFLAVIRL  M++GPVL+Q FV F+S K S
Sbjct: 330 CFWKDIMFTAFLAVIRLSVMFVGPVLIQNFVDFTSGKGS 368


>ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus]
          Length = 1499

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = +1

Query: 109 KDSRMKATSQMLNNMRMIKLQAWEEHFYKRVQ 204
           +DSRMKAT++MLNNMR+IK QAWEEHF KR++
Sbjct: 497 RDSRMKATNEMLNNMRVIKFQAWEEHFQKRIE 528


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