BLASTX nr result
ID: Coptis24_contig00025052
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00025052 (205 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003630933.1| Tau class glutathione S-transferase [Medicag... 60 1e-07 ref|XP_003628563.1| Multidrug resistance protein ABC transporter... 59 3e-07 ref|XP_003591547.1| ABC transporter C family protein [Medicago t... 58 7e-07 ref|XP_003591546.1| ABC transporter C family protein [Medicago t... 58 7e-07 ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4... 58 9e-07 >ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula] gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula] Length = 1320 Score = 60.5 bits (145), Expect = 1e-07 Identities = 27/39 (69%), Positives = 30/39 (76%) Frame = +1 Query: 1 CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117 CFWK T FLAVIRLC MYIGP+L+Q FV F+S KDS Sbjct: 1028 CFWKHIAITGFLAVIRLCVMYIGPLLIQSFVDFTSRKDS 1066 >ref|XP_003628563.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355522585|gb|AET03039.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1498 Score = 59.3 bits (142), Expect = 3e-07 Identities = 26/39 (66%), Positives = 30/39 (76%) Frame = +1 Query: 1 CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117 CFWK T FLA+IRLC MYIGP+L+Q FV F+S KDS Sbjct: 316 CFWKHIAFTGFLAMIRLCVMYIGPLLIQSFVDFTSRKDS 354 >ref|XP_003591547.1| ABC transporter C family protein [Medicago truncatula] gi|355480595|gb|AES61798.1| ABC transporter C family protein [Medicago truncatula] Length = 1057 Score = 58.2 bits (139), Expect = 7e-07 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = +1 Query: 1 CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117 CFWKD + TAFLAVIRL M++GPVL+Q FV F+S K S Sbjct: 330 CFWKDIMFTAFLAVIRLSVMFVGPVLIQNFVDFTSGKGS 368 >ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula] gi|355480594|gb|AES61797.1| ABC transporter C family protein [Medicago truncatula] Length = 1515 Score = 58.2 bits (139), Expect = 7e-07 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = +1 Query: 1 CFWKDFVSTAFLAVIRLCFMYIGPVLLQQFVAFSSDKDS 117 CFWKD + TAFLAVIRL M++GPVL+Q FV F+S K S Sbjct: 330 CFWKDIMFTAFLAVIRLSVMFVGPVLIQNFVDFTSGKGS 368 >ref|XP_004136172.1| PREDICTED: ABC transporter C family member 4-like [Cucumis sativus] Length = 1499 Score = 57.8 bits (138), Expect = 9e-07 Identities = 24/32 (75%), Positives = 30/32 (93%) Frame = +1 Query: 109 KDSRMKATSQMLNNMRMIKLQAWEEHFYKRVQ 204 +DSRMKAT++MLNNMR+IK QAWEEHF KR++ Sbjct: 497 RDSRMKATNEMLNNMRVIKFQAWEEHFQKRIE 528