BLASTX nr result

ID: Coptis24_contig00025041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00025041
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37064.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...    87   1e-15
emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]    87   1e-15
ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...    82   5e-14
ref|XP_002317301.1| outward rectifying potassium channel [Populu...    80   1e-13

>emb|CBI37064.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = -2

Query: 239 VSENTAIWLRHNSSICKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPDLL 60
           V +  A  + +N  I KS+YVIYKLKEMGKI+E D+LQI +QFNKLDP+NSG+ITLPDLL
Sbjct: 152 VEDLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLL 211

Query: 59  ESH 51
           E+H
Sbjct: 212 ENH 214


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = -2

Query: 239 VSENTAIWLRHNSSICKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPDLL 60
           V +  A  + +N  I KS+YVIYKLKEMGKI+E D+LQI +QFNKLDP+NSG+ITLPDLL
Sbjct: 327 VEDLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLL 386

Query: 59  ESH 51
           E+H
Sbjct: 387 ENH 389


>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = -2

Query: 239 VSENTAIWLRHNSSICKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPDLL 60
           V +  A  + +N  I KS+YVIYKLKEMGKI+E D+LQI +QFNKLDP+NSG+ITLPDLL
Sbjct: 327 VEDLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLL 386

Query: 59  ESH 51
           E+H
Sbjct: 387 ENH 389


>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
           [Ricinus communis] gi|223545669|gb|EEF47173.1|
           Calcium-activated outward-rectifying potassium channel,
           putative [Ricinus communis]
          Length = 390

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/62 (66%), Positives = 50/62 (80%)
 Frame = -2

Query: 239 VSENTAIWLRHNSSICKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPDLL 60
           V +  A  + +N  I KS+YVIYKLKEMGKI EKDILQI +QF+KLDP+N G+ITLPDLL
Sbjct: 327 VEDLIAADINNNGFISKSEYVIYKLKEMGKIGEKDILQICNQFSKLDPNNLGKITLPDLL 386

Query: 59  ES 54
           E+
Sbjct: 387 EN 388


>ref|XP_002317301.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222860366|gb|EEE97913.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 428

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/63 (65%), Positives = 48/63 (76%)
 Frame = -2

Query: 239 VSENTAIWLRHNSSICKSDYVIYKLKEMGKISEKDILQIGSQFNKLDPSNSGRITLPDLL 60
           VSE  A  + +N  + KS+YVIYKLKEMGKISEKDILQI  QF +LD  N G+ITL DL+
Sbjct: 365 VSEFLAADIDNNGFVSKSEYVIYKLKEMGKISEKDILQICQQFERLDTGNCGKITLADLM 424

Query: 59  ESH 51
           ESH
Sbjct: 425 ESH 427


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